KEGG   Plesiomonas shigelloides: SAMEA2665130_2989
Entry
SAMEA2665130_2989 CDS       T04378                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pshi  Plesiomonas shigelloides
Pathway
pshi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pshi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SAMEA2665130_2989 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pshi03400]
    SAMEA2665130_2989 (uvrA)
DNA repair and recombination proteins [BR:pshi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SAMEA2665130_2989 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SAMEA2665130_2989 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG RsgA_GTPase AAA_25 AAA_23 T2SSE nSTAND3 NACHT Viral_helicase1 APS_kinase cobW ScfRs DUF1924 ExoX-like_C BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: SBT62407
Position
1:3290340..3293195
AA seq 951 aa
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGDPRC
PVHDVPLAAQTVSQMVDKVLSLPEGQKLMLLAPIIKERKGEHSKTLQNLAAQGYIRARID
GEVCDLSDPPALELQKKHTIEVVVDRFKVRADLAQRLAESFETALTLSGGTVVVADMEDS
NAPELVFSSNFACPHCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVVQHPEL
SLAGGAIRGWDKRNFYYFQMLKSLAEYYNFDIEAPFNSLPPRIQKAVLSGSGRENIEFKY
INDRGDTTIRHHPFEGILHNMERRYKETESMAVREELAKYINNRPCASCHGSRLREEARH
VFIEDTTLPDIAQMSIAEALTFFHQLQLAGQKAQIAEKVLKEIRDRLMFLVNVGLNYLTL
ARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRDQGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEIVAEGTASEIMANPNSVTGQYLSGQREIAV
PTERTPADPAKVLRLIGARGNNLKDVTLSIPVGLFTCVTGVSGSGKSTLINDTLFRIAHR
ELNGATAEEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGMIKVEMHFLPDVYVPCDQCHGKRYNRETLEIKY
KGKSIHEVLDMTVEDAREFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRDTGKTLYILDEPTTGLHFADIQQLLTVLHKLRDHGNSIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVAESADSHTARFLKPILQRALHNAKQQD
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggataagatcgaagtcaggggtgcccgcacccacaacctgaaaaacatcaacctgatt
atcccgcgcgacaagctgattgtgatcaccggtttgtccggctccggcaagtcatcgctg
gcgtttgatacgctgtacgcggaaggtcagcgccgctatgtggagtcactgtcggcttat
gcacgccaatttctgtctttgatggaaaagccggatgtggatcatatcgaggggctgtcg
ccggctatctctatcgagcaaaagtccacgtcacataacccgcgctctaccgtcgggacc
attaccgaaattcacgactatttgcgcttgctgtttgcccgcgtgggtgacccgcgttgt
ccggtgcacgatgtgccgctggcggcacaaacggtcagtcagatggtggacaaggtattg
agcttgccagaagggcaaaagctgatgctgttggcgcccatcatcaaagagcgtaaaggt
gagcacagtaagacgttacaaaatctggccgcgcagggttatatccgcgcccgtatagat
ggcgaggtgtgtgatttatccgatcccccagcgctagagctgcaaaaaaaacacaccatt
gaagtggtggtagatcgtttcaaagtgcgcgcagatttagcgcagcgcttggccgaaagc
ttcgaaacggcgctcacactctctggcggcaccgtggtggtagccgacatggaggatagc
aacgcaccggagctggtattctcctccaactttgcctgtccgcactgtggttacagcatg
cacgagctggagccgcgtctgttctcctttaataaccccgcaggcgcatgcccgacctgt
gatggtcttggggtacagcagtattttgaccccgagcgagtggtgcagcatccggagctg
tcactcgccggcggtgcaattcgcggctgggataagcgtaacttctactacttccagatg
ctcaaatcgctggcggaatactataacttcgatattgaagcgccgttcaattcactgcct
ccgcgaattcaaaaggcggtgctgtccggctcggggcgagaaaatatcgagtttaagtac
attaacgatcgcggtgataccacgattcgccatcatcccttcgaggggatcttgcacaac
atggaacggcgctataaagagaccgaatccatggcggtgcgtgaagagctggctaaatac
atcaataaccgcccctgtgccagctgccacgggtcacggctgcgtgaagaggcacgtcat
gtgtttatcgaagacaccacgctgccggatatcgcacagatgagtatcgccgaggcgctg
actttcttccaccagctacaactggctgggcaaaaagcgcagattgccgagaaagtgttg
aaggaaattcgtgatcgcctgatgtttttggtgaatgtcggcttgaattacctgacactg
gcccgctcggcggaaacgctgtctggcggcgaggcgcagcggatccgtttggctagccaa
attggtgcaggtttagttggcgtgatgtatgtgctggatgaaccgtcgatcggcttgcac
caacgcgataacgagcgcttgctcaatacgctgatccacctgcgcgatcagggcaatacc
gtgattgtggtagagcacgatgaagatgcgattcgcgctgccgatcatattatcgatatc
ggcccgggtgctggcgtgcatggcggggaaatcgtagccgaaggcaccgccagcgagatt
atggccaatccgaattccgtcaccgggcaatatttgtccggtcagcgtgaaattgcggtg
ccgacggagcgtacaccggctgatcctgccaaagtgctgcgtctgatcggggcgcgcggc
aataacctcaaagacgtcacgctatcgattccggtcgggttgtttacttgcgtcactggg
gtgtcaggctcaggcaagtcgaccttgatcaacgataccctgtttcgtatcgcccatcgc
gagttaaatggagcgaccgctgaagagccggcgccgtatcgtgagatccaaggcttagag
catttcgataaagtaattgatatcgaccaaagcccgattggtcgtaccccacgctctaat
ccggccacttataccggcattttcaccccgatccgtgagctgttttctggcgtaccggaa
tcgcgggcacgcgggtataccccagggcgctttagctttaacgtgcgcggtggacgctgc
gaagcctgtcagggcgatggcatgattaaagtggagatgcacttcttaccggatgtgtat
gtgccttgcgatcagtgccacggcaaacgctataaccgcgaaaccttagagatcaaatac
aaaggtaagagtatccacgaagtgctggatatgacggttgaagatgcgcgcgagtttttc
gatgccgtaccggcactggcgcgtaagctgcaaactttgatggatgtgggattgtcctat
attcgtttgggtcaatcggcgaccaccttgtccggcggggaagcgcagcgggtgaaactg
gcgcgtgagctgtctaaacgcgataccggtaaaaccttgtacattctggatgaaccaacc
accggtttgcactttgccgatatccagcaattactgaccgtgctacataagctgcgcgat
cacggtaacagcattgtggtgattgaacacaatctggatgtgattaaaactgctgactgg
attgtcgatctggggccggaaggcggcagtggcggcggtgagatattggtcgctggtacg
ccagaaaccgtggcggaaagtgccgactcgcataccgcgcgcttcctcaaaccgattttg
caacgcgccctgcataacgctaaacagcaggactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system