KEGG   Pimelobacter simplex: KR76_14845
Entry
KR76_14845        CDS       T03528                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
psim  Pimelobacter simplex
Pathway
psim03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KR76_14845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psim03400]
    KR76_14845
Enzymes [BR:psim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KR76_14845
DNA repair and recombination proteins [BR:psim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KR76_14845
    RecFOR pathway proteins
     KR76_14845
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA TIP49 AAA_5 AAA_16 nSTAND3 RNA_helicase Mg_chelatase Sigma54_activ_2 MCM AAA_3 Zeta_toxin AAA_14 NTPase_1 AAA_25 DUF815 AAA_19 NB-ARC IstB_IS21 Rad17 TsaE NACHT ABC_tran Parvo_NS1 AAA_18
Other DBs
NCBI-ProteinID: AIY17722
UniProt: A0A0A1DM60
Position
complement(3026145..3027224)
AA seq 359 aa
MPFHEDELAEAEEVHLRSLTAAEAEGDERAVEAALRPRSLDEVVGQSRVRDQLGLVLEAA
RQRGRAPDHVLLSGPPGLGKTTLAMIISHEMSAPLRVTSGPAITHAGDLAAILSGLNEGE
VLFVDEIHRMSRPAEEMLYLAMEDFRVDVVIGKGPGATAIPLEIPPFTLVGATTRAGLLP
GPLRDRFGFTAHLEFYEPHELDLIVHRSAGLLGVELTDEGSSEIAGRSRGTPRIANRLLR
RVRDYAQVRADGVVTRGVAQAALDLYEVDALGLDRLDRAVLDALCRRFGGGPVGVSTLAV
AVGEERETVEEVAEPFLVRNGFLARTPRGRIATPAAWTHLGLTPPPLPFDDAAATLFDE
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcccttccacgaggacgagctcgccgaggccgaggaggtccacctccgctcgctcacc
gccgccgaggccgagggcgacgagcgcgccgtcgaggcggcgctgcgtccgcggagcctc
gacgaggtcgtgggccagagccgggtgcgcgaccagctcgggctcgtgctcgaggcggcg
cgccagcgcggccgggccccggaccacgtgctgctgtcgggtccgccgggcctgggcaag
accacgctcgcgatgatcatctcccacgagatgagcgcgccgctgcgggtcaccagcggc
ccggcgatcacccacgcgggtgacctcgccgcgatcctgtcggggctcaacgagggcgag
gtgctcttcgtcgacgagatccaccggatgtcgcgaccggccgaggagatgctctacctc
gccatggaggacttccgggtcgacgtcgtcatcggcaaggggccgggcgcgaccgcgatc
ccgctcgagatcccgccgttcacgctggtcggcgccaccacccgggccggcctgctgccg
gggccgctgcgcgaccggttcggcttcaccgcgcacctggagttctacgagccgcacgag
ctcgacctgatcgtgcaccgctccgccgggctgctcggcgtcgagctcaccgacgaggga
tcgtccgagatcgccggacgctcgcgcggcaccccccggatcgccaaccggctgctgcgc
cgggtccgcgactacgcccaggtgcgcgccgacggcgtcgtcacccgcggggtcgcccag
gcggcactcgacctctacgaggtcgacgcgctcggcctcgaccggctcgaccgcgcggtg
ctcgacgcgctgtgccgccgcttcggtgggggaccggtcggcgtctccacgctcgccgtc
gccgtgggcgaggagcgcgagacggtcgaggaggtcgccgagccgttcctggtccgcaac
ggcttcctcgcccggacgccgcgcggccggatcgccacgcccgccgcgtggacccacctc
gggctgactccgccgcccctgccgttcgacgacgccgccgccacgctgttcgacgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (40)   

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