KEGG T01374: PSM

Pseudoalteromonas sp. SM9913: PSM_A0497

Entry

PSM_A0497         CDS       T01374

Symbol

murF

Name

(GenBank) D-alanine:D-alanine-adding enzyme

K01929

UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]

Organism

psm Pseudoalteromonas sp. SM9913

Pathway

psm00300

Lysine biosynthesis

psm00550

Peptidoglycan biosynthesis

psm01100

Metabolic pathways

psm01502

Vancomycin resistance

Brite

KEGG Orthology (KO) [BR:psm00001]
09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSM_A0497 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PSM_A0497 (murF)
09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PSM_A0497 (murF)
Enzymes [BR:psm01000]
6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     PSM_A0497 (murF)

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-ProteinID:

ADT67450

Position

I:526939..528327

AA seq 462 aa
MIPMDFDWLANVLATDYQGDNRKVININTDTRTLCDGEVFLALKGPNFDGHKFIEQAKQK
GAIGVIVDHAVDTDIAQFVVADTRIALGTIGTAVMAQVAPKTIAITGSVGKTTVKEMCAA
ILSSKGDVLATKGNFNNDIGVPLTLLRLEPQHRFAVIELGANHIGEIAYTTAMTKPDVAV
VCNVAAAHLEGFGSLQGVAQAKGEIYDGLKEDGIAIVNCDSDFSQYWLDKLATRNIKCFS
SSEKLDIWAEDISLDAQARASFTLCTKQHSVPVKLALPGKHNISNALIAAALTSEFDVSL
EDIASALATMGEVKGRVNLIEASDSLTIIDDTYNANVKSVKAAIDLLSDIQGHRILALGD
MGELGEDARKYHQEVGEYALAQGIDELFTLGVLSKCASDVFGLPNRHFSNREQMLQQIQN
SISKVDKKITLVVKGSRSSRMELLVTDLVNGQQQAINGVSSC

NT seq 1389 nt +upstreamnt +downstreamnt
atgatcccgatggattttgattggctagctaatgtgctagcaaccgattatcaaggtgat
aatcgcaaggtgataaatataaacaccgatacccgtactttatgtgatggtgaagtgttt
ttggcgcttaagggcccaaattttgatggccataaatttattgaacaagcaaaacaaaaa
ggcgctataggcgtgattgtcgatcacgctgttgataccgatattgctcaatttgtagtt
gccgatacccgtattgcattaggcacaattggtacagcagtgatggcgcaagttgcacct
aaaactatcgctattactggcagtgtaggtaaaaccacagttaaagaaatgtgtgccgct
attttatcaagtaaaggggatgtattagccactaaaggtaattttaacaacgacattggc
gtaccgttaactttactcagattagagccacaacatcgctttgcggttattgaattaggc
gctaaccacataggtgaaattgcgtacaccaccgcgatgaccaaaccggatgtagctgtg
gtatgtaatgttgctgctgcccacttagaaggctttggtagcctgcaaggtgtggcacaa
gcaaaaggtgaaatttacgacggattaaaagaggatggcatcgccatcgtcaattgcgat
agtgactttagtcaatattggcttgataagttagcaacgcgcaatattaaatgtttttcg
agtagtgaaaagctcgatatttgggctgaggacatcagcctagatgcacaagctcgcgca
agctttactttgtgcaccaagcaacacagtgtgccggttaagttagcactgccaggtaaa
cataatattagtaacgcgcttattgctgcggcgttaaccagtgagtttgacgtgtcactt
gaggacattgccagcgcgttagcgaccatgggtgaagttaaaggacgggttaacctaatt
gaagccagtgattcactcaccattatcgatgatacatacaatgccaacgtaaagtcggtg
aaagctgcgattgatttacttagtgatattcaaggtcatcgtattttggcactcggtgat
atgggtgaacttggcgaagatgcccgtaaatatcatcaagaagtcggtgaatacgcatta
gcgcaaggcattgatgagttatttacactcggagtattaagtaaatgtgccagtgatgta
tttgggctgccaaatcgccatttctctaatcgtgagcaaatgctgcagcaaattcaaaac
agcattagcaaagtagataaaaaaattacccttgtcgtgaaaggatcacgcagttctcgc
atggagcttttagtaaccgatttagttaatggccagcaacaagccatcaatggagtatca
tcatgttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF

DBGET integrated database retrieval system