KEGG   Pseudoalteromonas sp. SM9913: PSM_A1005
Entry
PSM_A1005         CDS       T01374                                 
Symbol
ecfD
Name
(GenBank) TPR repeat-containing lipoprotein
  KO
K05807  outer membrane protein assembly factor BamD
Organism
psm  Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:psm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psm02000]
    PSM_A1005 (ecfD)
Transporters [BR:psm02000]
 Other transporters
  Pores ion channels [TC:1]
   PSM_A1005 (ecfD)
SSDB
Motif
Pfam: YfiO TPR_18 TPR_6 TPR_16 TPR_19 TPR_14 TPR_9 TPR_2 TPR_21 DUF6617 TPR_8 HEPN
Other DBs
NCBI-ProteinID: ADT67950
Position
I:complement(1064404..1065168)
AA seq 254 aa
MINKIGKRAFAIVFSVSVLSLGACSSAPDQEDIQRVPNRSAQALYEDAKQTLDSGLYARA
IELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYM
RGLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLL
NRMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTELS
QHAEQTRKFNSRNK
NT seq 765 nt   +upstreamnt  +downstreamnt
atgataaataaaatagggaaacgtgcattcgccattgttttttcagtttcagtgcttagt
ttaggggcctgctcgtctgcacctgaccaagaagatattcaacgcgtacccaacagatcg
gcacaagcactatacgaagatgcaaaacaaacgcttgattctggtttatacgctcgtgca
attgaattattaacggcaattgattctcgctacccgtttggtccgttttcaaaacaagtc
caaatggatttagtgtatgcacattaccaatcaggtaatacagagcaagcgcttgctaca
atcgaccgttttattcgcttaaacccaaaccacaaagatttagattacatgtactacatg
cgtggcttggttaatattaaggcggataaaaatgctttccaagaatactttggtgtagac
agagctgacagagatgctaaacgcacccgtgttgcttataccgacttatcaactttggtt
aaacgttttccagaaagtgattatgcgccagaagcaaaacgtcgtttagtttggttatta
aaccgcatggcacgttatgagttaaaagtggcaacttactattacgaacgtgaagcctat
ttagcagccgcaaatcgcggtaaatatgtggtagagcactactcacaaagtagttatctt
gatgcggcactcgccatgatggaaaaaagttacgagaagcttggcttgactgaactaagt
cagcatgcagagcaaacgcgtaaatttaatagcagaaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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