KEGG   Pseudopedobacter saltans: Pedsa_1762
Entry
Pedsa_1762        CDS       T01430                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
  KO
K03092  RNA polymerase sigma-54 factor
Organism
psn  Pseudopedobacter saltans
Pathway
psn02020  Two-component system
psn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Pedsa_1762
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Pedsa_1762
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psn03021]
    Pedsa_1762
Transcription machinery [BR:psn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Pedsa_1762
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI MarR HTH_12 HTH_IclR DUF1474
Other DBs
NCBI-ProteinID: ADY52319
UniProt: F0S857
Position
2047305..2048774
AA seq 489 aa
MLKQNLQQKLLQKLSPQQIQFIKLLQVPTVALDTRIKEELEENPALEDISLADMNEAPED
YPDRDPDDEYNSDEGGDDLDDFNIEDYLQEDNLNDYGNRYDNDDDEDRKELPIAVSNTFF
ENLQAQLDLIPLDDKSYMIAQQIIGSLDDDGYLRRSIASLVDDLAFSQNVIAEDEEAEEM
LKVIQTFDPPGIGARDLQECLLIQLRKKDASNPIVKNAVNIIENHLEEFTKKHYDKLEKM
LGLSPEELKDSINEILKLNPKPGDSGISNIKQLQIIPDFHITKTDNTLTLTLNSKNAPEL
RVSRSYQEMLEHYEKSSEKDKKLKEAVHFVKQKLDSAKWFIDAIKQRQQTLLKTMNAIMQ
YQYEYFLNDGDERYLKPMILKDIADKIGMDISTVSRVANSKYVQTEFGTYLLKSFFSEAI
QTETGEEVSNKEVKKILEECIGQENKKKPLADEKLTEILKEKGYNIARRTVAKYREQLGI
PVARLRKEL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgctaaaacagaatcttcaacaaaaacttttacagaagctttccccgcagcaaattcaa
tttataaaactgctgcaagtaccaaccgttgcgctagatactagaatcaaagaagagtta
gaagaaaatcctgcgcttgaagacatcagtctggcagatatgaatgaagctccagaagat
tatccagaccgtgatccggatgatgaatacaactccgatgaaggtggagacgatctcgat
gatttcaatatcgaagattacctacaggaagataatttaaatgattacgggaacaggtat
gataatgatgatgacgaagacagaaaggaattaccaattgccgtaagcaatacctttttc
gaaaatctgcaagcacaattggacttaattcctttggatgataaatcctatatgattgcc
cagcaaatcataggcagtctggacgacgatggataccttaggagatctatagcatcattg
gtagatgacctggccttttcgcagaatgttattgccgaagacgaagaagcagaagaaatg
ctgaaagttattcagacatttgatccgcccggtattggcgcaagagatcttcaggagtgt
ttactgatacagcttagaaaaaaagacgcctccaaccctatcgtcaaaaatgcagtcaac
attatagaaaaccacttagaagagtttacaaaaaaacattacgataagctggaaaaaatg
ctgggtttaagtcctgaagaacttaaggattccataaacgaaatattaaagcttaaccca
aaaccgggcgattctggtatttccaatatcaaacagctgcaaatcattcccgattttcat
attactaaaacggataatacacttacccttactctaaactccaaaaatgcaccggaatta
agagtaagcagatcgtatcaggaaatgctggagcattatgaaaagtcttcagaaaaagat
aaaaaacttaaagaagcagttcattttgtaaaacagaagcttgactctgcaaaatggttt
atcgatgccataaaacaaagacaacaaactttgttaaaaaccatgaacgctattatgcaa
taccaatacgagtattttctaaatgatggagacgagcgttatttaaaaccaatgatactt
aaggatattgcagataagatcggcatggatatttccactgtttcccgtgttgcaaactcc
aaatatgtacagactgaatttggcacttatcttttaaaatcctttttctccgaagctata
caaaccgaaacgggagaagaggtttcgaataaagaagttaagaaaattcttgaggaatgt
atcggtcaggagaacaagaaaaaacccctggcagacgaaaaactaacagaaattttaaag
gaaaaaggctacaatatagcccgtagaacagtcgccaaatacagagaacaacttggtata
cccgtagccaggttgcgaaaagaactataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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