KEGG   Pseudarthrobacter sp. NIBRBAC000502771: NIBR502771_06415
Entry
NIBR502771_06415  CDS       T06121                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
psni  Pseudarthrobacter sp. NIBRBAC000502771
Brite
KEGG Orthology (KO) [BR:psni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psni03032]
    NIBR502771_06415
   03036 Chromosome and associated proteins [BR:psni03036]
    NIBR502771_06415
   03400 DNA repair and recombination proteins [BR:psni03400]
    NIBR502771_06415
DNA replication proteins [BR:psni03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NIBR502771_06415
Chromosome and associated proteins [BR:psni03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    NIBR502771_06415
DNA repair and recombination proteins [BR:psni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      NIBR502771_06415
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QDG61985
UniProt: A0A4Y6QPU1
Position
1348681..1348965
AA seq 94 aa
MAKNRSELVAEVAGKAGTSQAAVNSVLDALFEVFETSVAAGEKITIPGWLAVERTDRAAR
TGRNPQTGETIQIAAGHSVKLTAGSKLKAAVSKK
NT seq 285 nt   +upstreamnt  +downstreamnt
atggctaagaaccgtagtgaacttgttgcagaggtagctggcaaggccggcaccagccag
gctgccgtcaactccgtcctcgacgcactgttcgaggttttcgagacttccgtcgccgcc
ggcgagaagatcaccatcccgggctggctcgccgtcgagcgtaccgaccgtgcagcccgc
accggccgcaacccgcagaccggcgagaccatccagattgcagcaggccacagcgttaag
ctgaccgccggctccaagctgaaggctgcagtctccaagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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