KEGG   Psychrobacter sp. G: PSYCG_06360
Entry
PSYCG_06360       CDS       T02715                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pso  Psychrobacter sp. G
Pathway
pso03030  DNA replication
pso03430  Mismatch repair
pso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSYCG_06360 (dnaE)
   03430 Mismatch repair
    PSYCG_06360 (dnaE)
   03440 Homologous recombination
    PSYCG_06360 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pso03032]
    PSYCG_06360 (dnaE)
   03400 DNA repair and recombination proteins [BR:pso03400]
    PSYCG_06360 (dnaE)
Enzymes [BR:pso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSYCG_06360 (dnaE)
DNA replication proteins [BR:pso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSYCG_06360 (dnaE)
DNA repair and recombination proteins [BR:pso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSYCG_06360 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: AGP48794
Position
complement(1441206..1444967)
AA seq 1253 aa
MAFVHLGIHSEYSITDSIVRIKPLVKAAAADNQSALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMENEDTRLTLLAMNNEGYQNITRIVSLGFTEGRADPVNHGTPVIKRSHILAH
AAGVIVLFTEKSDVGQALIGSMPEKADELLTEWQAQFADRLYFAIKRTNRTGEDAFIKAA
IHSGAKHNIPIIAHNDVRFLKQDDFDAHEARVCIAGSYVLADQNRPQTYSDEQYLKTQAQ
MEQLFADIPQVIDNTLRLATRCNVTLTLGINVLPEFPVPEGETTESFFRLESQRGLDNRL
DKLFPVDARSDNWSDIRQRYDDRLEYELKVILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARVQSKSYFLASKMSKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDAIEVWEMAIKLEGVCRNVGKHAGGVLIAPHKITDFSAIYCDDEGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVIDAAVRNINLRRAKEGKDALVLEDLPLDDAKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATAQGIDEATSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFDLTVVNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVESIVDARRREGPFKDLYDFCRRVDIKKVNKRTLEALVSAGCFDDFAATLRPDLPA
DEAYEIRGALMSQLPSAVQAAEQDRQNREIGMMDLFGEMDGVVGAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPIDEYRDELKRYTSGARLDKLTDTGYNGSCYFAGLVIDIANFGT
RNVITLDDGTSRLEVSCYAERFNRVKEQLKIDEVVIIKGSIRERDGRLFARLDNAMSMVD
ARLRWLKKISIKIHGSDIELLTRMQPLLKSAQVSMIPVPKTSHNDEQDEQDEQDEQSDNT
NNNSFVGYNTSMGGSLYDENGNDLLALENNMAQDAYLNDTDQSLSNKSYANNALSNTDVS
IRDNCLPLGLSIYEEYGIANVGLSEHWRIYPNDDNLQQLKSMISEDNLHFHYS
NT seq 3762 nt   +upstreamnt  +downstreamnt
atggcatttgtacaccttggcatccacagcgaatattctattaccgattctatcgtccgt
atcaagccgttggttaaagcggcggcggcagacaatcaaagcgcccttgccttgacggat
ctatccaacctgtatgcaacggtgaaattctatcgtgcctgcttaggtgcaggtatcaag
cccattatcggcagcgaagtcatcatggagaatgaagacacgcgcttaactttattggcg
atgaacaacgaaggctatcaaaacatcactcgtatcgtatcgcttggcttcaccgaagga
cgtgctgatcctgttaatcacggtactcctgttattaaacgcagccatattttagcgcat
gcggcaggtgtcattgtcttattcactgaaaagtcagacgttgggcaagcattgattggc
tccatgccagaaaaagccgatgagctactgacagaatggcaagcgcagtttgctgatcgc
ttatattttgcgattaaacgcaccaatcgtactggcgaagatgcctttattaaagctgct
attcattcaggtgctaagcacaacatccccatcattgcccataatgacgtgcgcttctta
aagcaagatgattttgatgctcatgaagcgcgagtttgtattgctggctcttatgtactt
gccgaccaaaatcgcccacagacttattcagatgagcagtacctcaagacccaagcgcag
atggaacagctatttgctgatattccgcaggtgattgataataccttgcgcttagcaact
cgctgtaatgtgaccttgacgctgggtattaatgtcctaccagagtttccagtacctgag
ggcgagaccactgaatctttctttcgcttagaatcgcagcgtgggcttgacaatcgttta
gacaagctctttccagttgacgcgcgcagtgataattggagtgatatccgccaaagatac
gatgaccgcttagagtatgagctcaaggttatcttatcaatgggattccccggttatttc
ctgatcgtgatggactttatccgctgggcaaaagccaatggcgtaccagtcggtcccggt
cgtggttctggtgcaggctctctcgtggcttatgcgctcaatattaccgacctcgaccct
attcattacgatctactatttgagcgcttcttaaatcctgaacgtgtctcaatgcccgat
ttcgatattgacttttgtattgaaggtcgtgatcgcgtcattgattatgtggcgcaaact
tatgggcgtgaagcggtgtcgcagattattacctttggtaccatggcagcaaaagcagtg
gtacgagatgtggcgcgggtacaaagcaaatcatactttcttgccagtaaaatgtcgaaa
cttatcccaaaaactcccggtatcacgctcagtcaggcgcttgagcaagagccgcaactt
aaagacttaatctccaatcctgataatatggattatgaagatgctatcgaagtatgggag
atggcgattaagctggaaggtgtgtgtcgaaacgtcggtaaacatgccggtggcgtacta
atcgccccgcataaaatcaccgattttagcgccatttattgtgatgatgaaggtcaccgc
gtcagtcagtttgataaagatgatgttgaagcggttgggctggtgaagtttgactttttg
ggtctacgtaacttgaccgtgattgatgctgctgtcagaaatatcaacctgcgccgtgca
aaagaaggcaaagatgcgttggtgttagaagacctgccgttagatgatgctaaagcctac
aagctcttgcaagatgctaagaccactgctgtctttcagcttgaaagtatgggtatgaaa
aaatatttggcgaaattacaaccgaccaacatcgaagacgtgattgccatgtgtgcgctg
tatcgcccaggtccactcgatgcaggcatggtagagatgtatatcgaccgtaagcatggt
cgcgaagaagtcatttatgaccatcccaatcttgagccgattttagaaaacactaacggc
gttatcgtctatcaagaacaagtgatgcaaatctcgcaggtgatggctggctatagctta
ggcggtgctgatatgctccgccgagctatgggtaaaaagaaacctgaagagatggcaaaa
cagcgcgatatttttgtcacgggtgctacggcacaaggtattgatgaagcgacatcaggg
ggcgtatttgacttgatggaaaagttcgccggttacggttttaaccgctcgcattctgcc
gcatatggcgtacttgcttatcagaccgcgtatctaaagcagtactaccctgctgaattt
atggcggcggtattgacatcagatatgaacaacaccgataacgtcgtgttctttatcaat
gactgccgtgaaaactttgatttgaccgtggttaatccatcggttaatcgtagtgagtgg
cattttgttgctgataccccgaccaatattatttatggcttgggtgcgattaaaggggtc
ggtgaaggcgcggtcgagtctattgtcgatgcacgaagacgtgaaggaccttttaaagat
ctatatgatttttgccgtcgcgttgatatcaaaaaggtcaataaacgcacgcttgaagcc
ttggtaagtgctggctgttttgatgactttgcggcgactttacgtccagacttgccagcc
gatgaagcctacgagattcgcggtgcattaatgagtcagctgccaagtgcggtacaggcg
gctgagcaagaccgtcaaaaccgtgaaatcggtatgatggatttgtttggtgaaatggat
ggtgtcgtcggtgccccaccactcgttatgacgccagagctaatttggggtgataaacac
cgcctaaaagcagagaaaaatactctagggctttatttgaccggacatcctatcgatgaa
tatcgagacgagctcaaacgctatacctcaggtgctcgtctcgataaattgactgatacg
ggctataacggtagctgctattttgctggtcttgtcattgatatcgccaactttggtact
cgtaacgttattactttagacgatgggacatcaaggttagaggtcagctgttatgctgag
cgctttaaccgtgttaaagaacagttaaaaatagatgaagtcgtcataattaaaggcagc
atccgtgaacgtgatgggcgtttatttgctcgtcttgataatgccatgagtatggtcgat
gctcgcctaagatggctcaaaaaaatcagtattaaaattcatggtagtgatatcgagctg
ctgacacgcatgcagcctttactgaaatcggcacaagtcagcatgattccagtaccaaaa
acatctcataacgatgagcaagacgagcaagacgagcaagacgagcaaagcgacaatact
aataacaatagttttgtcggttataatacctcaatgggtggcagtctatatgatgaaaat
ggtaatgatttattggcattagagaataatatggcacaagatgcttatttaaacgacact
gaccaaagcctaagtaacaaaagctacgccaacaacgctttgagcaacaccgacgtctct
attagagataattgcctaccccttggactcagtatttatgaagaatatggcattgccaat
gtaggactgtctgagcattggcgcatctatccaaatgatgataatttacagcagctaaaa
agcatgattagcgaagataacttacattttcactacagctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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