KEGG   Phytophthora sojae: PHYSODRAFT_285454
Entry
PHYSODRAFT_285454 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
psoj  Phytophthora sojae
Pathway
psoj03420  Nucleotide excision repair
psoj04120  Ubiquitin mediated proteolysis
psoj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PHYSODRAFT_285454
   04120 Ubiquitin mediated proteolysis
    PHYSODRAFT_285454
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_285454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psoj04121]
    PHYSODRAFT_285454
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_285454
Enzymes [BR:psoj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     PHYSODRAFT_285454
Ubiquitin system [BR:psoj04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   PHYSODRAFT_285454
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     PHYSODRAFT_285454
   Cul2 complex
     PHYSODRAFT_285454
   Cul3 complex
     PHYSODRAFT_285454
   Cul4 complex
     PHYSODRAFT_285454
   Cul7 complex
     PHYSODRAFT_285454
   Cul8 complex
     PHYSODRAFT_285454
   Cul9 complex
     PHYSODRAFT_285454
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PHYSODRAFT_285454
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PHYSODRAFT_285454
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 20640053
NCBI-ProteinID: XP_009523382
JGI: Physo3_285454
UniProt: G4ZBQ1
Position
Unknown
AA seq 113 aa
MDEEMKSEEVKAEVAPAAAAASEEKRFEIKKWNAVALWSWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGR
NT seq 342 nt   +upstreamnt  +downstreamnt
atggacgaggagatgaagagcgaggaggtgaaggcggaggtggcgcccgctgctgccgcc
gccagcgaggagaagcgcttcgagatcaagaagtggaacgccgtggctctgtggtcctgg
gacatcgtggtggacaactgcgccatctgccgcaaccacatcatggacctgtgcatcgag
tgccaggccaaccaggcgtcggccaccagcgaggagtgcacagtggcctggggcgtctgc
aaccacgccttccacttccactgcatctcgcggtggctcaagacccgccaggtgtgcccg
ctggacaaccgcgagtgggagttccagaagtacggcagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system