KEGG   Phytophthora sojae: PHYSODRAFT_540459
Entry
PHYSODRAFT_540459 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
psoj  Phytophthora sojae
Pathway
psoj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHYSODRAFT_540459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psoj03019]
    PHYSODRAFT_540459
Enzymes [BR:psoj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     PHYSODRAFT_540459
Messenger RNA biogenesis [BR:psoj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     PHYSODRAFT_540459
SSDB
Motif
Pfam: CAF1 DUF2179
Other DBs
NCBI-GeneID: 20662408
NCBI-ProteinID: XP_009521153
JGI: Physo3_540459
UniProt: G4Z0L6
Position
Unknown
AA seq 606 aa
MLRAQSSLRRSLLVVARPRRFSSSAASLAADADSKPTDEMNVTRHNFAKCLADLQKDLAL
PTCRFVAIDTEFTGLSPNEFEREQYLDTLEERYRKVKRAGESFLVTQFGLSTVHLDQKDQ
FQIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLAKTPVMKK
RLQRRIDGLTKVNKNLQLSDDGVAFQKDVNEQLDQWIAGGAKKGEKLLVPTRNSFYSMVV
HETVRSKASYLYSEAAEGGVEVSYVSKKIKEELIAAKVKDMRREMDEAIGFSKVIEALSE
SKLPVVGHNALLDFVYVFHQFYKPLPETLAEFKTQLLGLFPTIYDTKHVTLRSPLGDKLK
STGLSSLFEYMRENVKPEPESLIPSDEHFDTYRQALKAEADGNESLLCHEAGFDAFMTAV
CFLGLLAHDAKGELPDQQVPKEGSSARLKVRLEELDSLKNQLNLMISDESFLDLGNVSQT
IDRTRVYRVSSTTKRRIQHVRMEDVFKSSKVQRIVRESDQDAFVVLTEPAEEVNDETKAE
LGVNISTYDEHMAAEAEKARKEKEEADRKLFEKISAARASTSSGETASGDTTAEGPSAVW
NRCTIS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgctgcgtgctcagtcgtcgctccgccgctcgctgctcgtcgtcgctcgcccccgccgc
ttcagtagcagcgccgcctccctcgccgccgacgcagactccaagcccacggacgagatg
aacgtgacgcgccacaacttcgccaagtgcctggccgacctgcagaaggacctggcgctg
cccacgtgccgcttcgtggccatcgacacggagttcacgggcctgtcgcccaacgagttc
gagcgcgagcagtacctggacacgctcgaggagcgctaccgcaaggtgaagcgcgcgggc
gagagcttcctcgtcacgcagttcgggctctcgacggtgcacttggaccagaaggaccag
ttccagatcaagacctggaacttctacgtgttcccgcggccctacggctcgctggacgag
cgcttcctgtgccaggcctcgagtctgcagttcctgtcggagcacggcttcgacttcaac
aagttcatcggcgacggcatccccttcgtcaacttggccaagacgccggtcatgaagaag
cgcctgcagcgccgcattgatgggcttacgaaggtgaacaagaacctgcagctctcggac
gacggcgtggccttccagaaggacgtgaacgagcagctggaccagtggatcgccggagga
gccaagaagggcgagaagctgctcgtgcccacccggaactccttctactcgatggttgtg
cacgagactgtgcgctccaaggcgagttacctgtactcggaggctgccgagggcggcgtg
gaggtgtcgtacgtgtccaagaagatcaaggaggagctcattgcggccaaggtcaaggac
atgagacgcgagatggacgaggccatcggcttctccaaggtcatcgaggcgctgagcgag
agcaagctgcctgttgtcggacacaacgcgctgctggactttgtgtacgtgttccaccag
ttctacaagccgctgccggagacgctggcggagttcaagacgcagctgctggggctgttc
cccaccatctacgacaccaagcacgtgacgctgcgctcgcctctcggtgacaagctcaag
tccacgggtctgtcgtctctgttcgagtacatgcgcgagaacgtcaagcctgagcccgag
agcctcatccccagcgacgagcactttgacacgtaccgccaagcgcttaaggctgaggct
gacggcaacgagagcctgctgtgccatgaggctggtttcgacgccttcatgacggctgtg
tgcttcctgggtctgctggctcacgacgccaagggagagctgcccgaccagcaggtgccg
aaggagggcagctctgctcgtcttaaggtccgtctggaggagctggacagcttgaagaac
cagctgaacctcatgatctcggacgagagcttcctcgacttgggcaacgtctcccagacc
atcgaccgcacccgcgtgtaccgcgtgagcagcacgaccaagcgacggatccagcacgtg
cgcatggaggacgtgttcaagtcgtccaaggtgcagcgtatcgtgcgtgagagcgaccag
gacgcgttcgtggtgctcacggagcccgccgaggaggtgaacgacgagaccaaggccgag
ctgggcgtgaacatctccacatacgacgaacacatggctgccgaggccgagaaggctcgt
aaggagaaggaggaagccgaccgcaagctcttcgagaagatctcggctgctcgtgcttca
acatcaagtggcgagaccgcgagcggtgacaccactgccgagggtccgtctgccgtgtgg
aatcgctgcaccatttcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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