KEGG   Papaver somniferum (opium poppy): 113278808
Entry
113278808         CDS       T05758                                 
Name
(RefSeq) DNA topoisomerase 1 beta-like
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psom03032]
    113278808
Enzymes [BR:psom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     113278808
DNA replication proteins [BR:psom03032]
 Eukaryotic type
  DNA Topoisomerases
   113278808
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc
Other DBs
NCBI-GeneID: 113278808
NCBI-ProteinID: XP_026383337
Position
5:18239876..18242813
AA seq 779 aa
MTKTTTTSDSSGMVPPVLPSGSNNKSKQFSDSRFRYIGEENSKLMNEDKMNLTSLFQLRR
PSSNVDSKHEYDSKMMTTTTSDSGMVVSPSVLPSGSNKSKQSQVGGDSRFPYTVEENSKL
MDEDKMNLTSLFQLPSSSDSIKQVSETANTDDQDDEEDNLTLIERKEKLEEDNLTLAERK
EKLEAASALGRISKTKIAAKKVTSSSLKCASKKIIKSRSKSTNLHLNSGAGKKWTTFAHN
GIVLPPPYKPHGVKMLYNGEQVELTPEQEEVATMFAVMKDTEFAAKPKFIENFMNDWRVI
LGKEHVIKKFHLCDFTPIYDWHQNEKDKKKQLSALERKALKEEKLKEDERYMWAFVDGKK
EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPDEITINIGKGEPVPECPIPNERWKEVKH
DNTVTWLAFWKNPIDPKAFKYVFLDDTSSWKGQSDKDKYEKARLLKDYILDIRANYRKDF
RNKDLMKQQISVAAYLIDMLALRAGNEKDDDEADTVGCCTLKVENVSLVPQTNKLEINFL
GKDSIKYENTVEVDPLVYKAIGEFKKGKNTGEELFDKLDTYKLNAHLKELMPGLTAKVFR
TYNASITLDKLLNSEIMNRNVAEKVVVYNRANKEVAKLCNHQRSEPKSHGAQMLKLRDNI
VKLKGVLDGLETNLHRVRKGKAPLQLDADDGKPKKNFTPEILQRKIKLTLDKIEKTERDM
DLKKELKTTALGTSKTNYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgacgaaaacaacaacaacatctgacagcagcggcatggtgcctcctgtactgccatcg
gggtccaataataaatcaaagcagttttcagattccagatttcgttatatcggggaagaa
aattccaaattgatgaacgaagataaaatgaatttaacgtcattgttccagttgcggcgg
ccgtcatctaatgtcgacagcaagcatgaatatgattcaaagatgatgacaacaacaaca
tctgacagcggcatggtggtgtccccgtctgtactgccatcggggtctaataaatcaaag
caatcgcaggttggaggagattccagatttccttatactgtggaagaaaattccaaattg
atggacgaagataaaatgaatttgacgtcattgttccagttgccgtcgtctagtgacagt
attaagcaagtctctgaaacagcaaacacagatgaccaagatgatgaagaggacaacctt
acgctcatcgagagaaaggaaaaacttgaagaggacaaccttacgctcgccgagagaaag
gaaaaacttgaagctgcttctgcattgggtaggatatccaaaactaaaatagcagcaaaa
aaggtgacttcttcttcactcaagtgtgcatcaaagaaaataataaagagcaggtctaag
tcgacgaatttacacctcaattctggtgccggaaagaaatggactacttttgcacacaac
ggtattgtattaccacctccatacaagccgcacggagtgaagatgctctacaatggagaa
caggttgaattgactcccgaacaggaggaggttgcgaccatgtttgcagtcatgaaagac
acggagtttgctgcgaaaccaaagtttatagaaaacttcatgaatgattggagagtcata
cttgggaaagaacacgttatcaaaaaattccatctgtgtgatttcactccaatctacgat
tggcatcagaatgagaaagacaagaaaaaacagttgagcgcactagaaagaaaagccttg
aaagaagaaaagctgaaggaggatgagaggtacatgtgggcttttgtcgatggcaaaaaa
gagaaggttggaaattttagagtcgaaccaccagggcttttccgcggccgtggggagcat
cctaagatgggaaagctgaaacgtagaattcgtccagacgagattacaataaatatagga
aaaggtgaacctgttccagaatgtccaatccctaatgaaaggtggaaagaagtgaagcat
gacaatactgttacctggttagcattttggaaaaatccaattgatccgaaagcattcaag
tacgtctttttagacgatactagctcatggaaaggccaaagtgacaaggacaaatatgag
aaagcaaggctactcaaggactacatactcgatataagagcaaattatagaaaggacttt
aggaacaaagatctaatgaagcaacaaatttccgtggctgcttaccttattgatatgttg
gccctcagggccgggaacgagaaggatgacgatgaagctgacacagttggttgttgtaca
ttgaaagttgagaatgtcagcttagtgcctcagacaaacaagttagagatcaacttcctt
ggaaaagattcgattaaatatgaaaacactgttgaagtcgaccctcttgtttataaagca
attggagagtttaaaaagggaaaaaataccggcgaggagctttttgataagctagataca
tataaactcaatgctcatctcaaggagctcatgccgggcctcacagcaaaagttttccgc
acatacaatgcatctatcactttggataagctgctgaacagtgaaatcatgaatcgcaat
gttgcagaaaaagttgttgtttataatcgtgcaaacaaagaggttgctaagttatgtaat
caccaacgatccgagccaaagtcgcatggcgcacaaatgctaaagttaagagacaatatt
gttaagttgaagggtgtattagatggactggaaaccaatttgcacagggtgagaaaaggg
aaagctccactgcagcttgatgctgatgatgggaaaccaaagaagaattttacccccgaa
atattgcagaggaagattaagctgacacttgacaagattgagaagaccgaacgggatatg
gatttaaagaaggaactaaaaactactgcgttaggcacatctaagactaattatcttgat
cctagaatctcagttgcttggtgtaagcgccatgaagtcccaattgagaagatattcaac
aagtcgcttctggcaaagtttgcttgggcaatggatgttgatcctagcttcagattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system