KEGG   Papaver somniferum (opium poppy): 113283495
Entry
113283495         CDS       T05758                                 
Name
(RefSeq) WD repeat-containing protein ATCSA-1-like
  KO
K10570  DNA excision repair protein ERCC-8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03420  Nucleotide excision repair
psom04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113283495
  09124 Replication and repair
   03420 Nucleotide excision repair
    113283495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psom04121]
    113283495
   03400 DNA repair and recombination proteins [BR:psom03400]
    113283495
Ubiquitin system [BR:psom04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     113283495
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113283495
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 113283495
NCBI-ProteinID: XP_026388554
Position
5:complement(163990556..163995620)
AA seq 454 aa
MWKVVGDRETGKLPPYQFINRVKSNRISSLELSNYKEIVSAHKGAVNSLQVDLIEGRYLL
AGASDGSIAVYDVQSATKHEGNGMVAKHERILVVDKRHEQGHKYAVSSATWYPVDTGLFI
SGSYDQSVNVWDTNTTRVVVDFKLPGKVYRTAMSSVAGSHMLIATGTEDVQVRLCDIASG
AFTHTLSGHRDGVMAVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSRSQLGRRP
PLLEHFPTKVSTPKSFSAGQSSTIKVRAPQKKTANGTGAKRVPSLYRVPSQTKGSTGKRL
HPGLLSSNDRATAHYGAVTGLKVTENGMYLLSAGSDSRLRLWDIESGCNTLVNYEVKRIE
PRKALQLATTQDSSLVFVPCMATIKAFDVWSGRTSETFRGHYENVNCCWFNSQDQEMYTG
SNDRQILVWSPPKIRLDEMDGGGNSEQDQDCWSD
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtggaaggtggtcggagatagagaaactggtaaacttcccccttatcaatttattaac
cgtgtcaaatccaatcgcatctcttctttggaactttcaaactacaaagaaatcgtctct
gctcataaaggagctgtcaattctctccaggttgatttgatcgaaggacggtatctgtta
gctggtgcttctgatggttcaattgcagtttacgatgttcaaagtgccacaaaacatgaa
ggaaatggcatggttgcgaagcatgagcgcatattggttgttgacaagcgccacgagcaa
ggtcataaatatgcagtgtcttcggccacttggtatccagttgacacagggcttttcatc
agtggttcttatgatcagtctgtaaacgtatgggataccaatacaacacgagtggtagtc
gattttaaattgcctggaaaggtctatcgaacagctatgtcgtcagtagctggttctcac
atgctaattgctactggaactgaagatgttcaagttcgtctatgtgacattgcttcaggg
gcatttacacacacattatctggtcatcgtgatggtgtaatggcagtcgaatggtctact
tctagtgagtgggttctggttactggcggatgtgatggagcaatacgtttttgggacata
aggagagcaggatgttttcaagttttagaccaatctcgatctcaacttgggagacgaccg
cctctccttgaacacttccccacaaaagtatcaacaccaaaatccttttcagcaggtcaa
tcttctaccatcaaggtgagggcaccacaaaagaaaacagctaatggtactggtgcaaag
cgggtgccatccctttatagagttccaagtcagaccaagggttcaactgggaagagatta
catcctgggttgttgtccagtaatgatcgtgctacagctcactatggtgctgttactggg
ctaaaagtaactgaaaatggaatgtatttgttgagcgcaggctctgattcacgattgaga
ttgtgggatattgaatctggctgcaacactcttgtgaattatgaagttaagcgcattgaa
ccccggaaggcattacagttggccactactcaggattcatcccttgtcttcgttccgtgt
atggcaaccatcaaggcatttgatgtgtggtcaggtcgaacatccgagacatttcggggt
cactatgaaaatgtaaattgctgctggtttaattcacaggatcaggaaatgtatacaggt
agcaatgatagacaaattcttgtgtggtctccacccaaaatacgacttgatgaaatggat
ggaggaggaaatagtgagcaagatcaggactgctggagtgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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