KEGG   Papaver somniferum (opium poppy): 113287014
Entry
113287014         CDS       T05758                                 
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/6/8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
psom04141  Protein processing in endoplasmic reticulum
psom04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113287014
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113287014
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113287014
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psom01009]
    113287014
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113287014
   03009 Ribosome biogenesis [BR:psom03009]
    113287014
   03110 Chaperones and folding catalysts [BR:psom03110]
    113287014
   04131 Membrane trafficking [BR:psom04131]
    113287014
   03051 Proteasome [BR:psom03051]
    113287014
   03029 Mitochondrial biogenesis [BR:psom03029]
    113287014
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113287014
Protein phosphatases and associated proteins [BR:psom01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     113287014
Spliceosome [BR:psom03041]
 Complex B
  Other components
   Prp19 complex
    113287014
 Complex C
   Prp19-CDC5 complex
    113287014
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    113287014
Chaperones and folding catalysts [BR:psom03110]
 Heat shock proteins
  HSP70 / DNAK
   113287014
Membrane trafficking [BR:psom04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    113287014
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    113287014
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    113287014
Mitochondrial biogenesis [BR:psom03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    113287014
Exosome [BR:psom04147]
 Exosomal proteins
  Proteins found in most exosomes
   113287014
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A
Other DBs
NCBI-GeneID: 113287014
NCBI-ProteinID: XP_026391454
Position
6:15233317..15236545
AA seq 650 aa
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRKVSDSSVQADIKLWPYKVTAGPGEKPVITVTYKGEEKEFSA
EEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGSIGGLNVLRIINEP
TAAAIAYGLDKKSSSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY
TSITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQEFF
NGKELCKSINPDEAVAYGAAVQAAILTGASNDNLNQILLLDVAPLSLGLETAGGVMTTLI
ARNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPAAPRGVPQI
TVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIEKMVQEAEKYKTEDEEHKK
KIESKNGLENYAYNMRNTIKDENIAGKLAPEDKKKIEDAIEAAIQWLDSNQLAEADEFDD
KMKELESLCNPVIAKMYQGGAGPDMGGFGGMDEDGPSMGGGAGPKIEEVD
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcaggaaaaggtgaaggaccagcaattggtattgatttgggtacaacatattcatgt
gtaggagtgtggcaacatgatcgcgtagagattattgctaatgatcaaggcaatagaact
acaccttcttatgttgcttttaccgacactgaacgtttgattggtgatgctgctaagaat
caagttgcaatgaaccctatcaacactgtctttgatgcaaagcgtttgattgggagaaag
gtttcggattcatcagttcaagctgatattaagctgtggccttacaaggttacagctgga
ccaggtgaaaaacccgtgattactgtgacttacaaaggagaagagaaggagttttcagct
gaagaaatttcatctatggttctcatcaagatgcgcgagattgcagaggcgtaccttggt
tcttctataaagaatgcggttgttactgtccctgcatacttcaatgactcgcagcgtcaa
gctacaaaggatgctggttccattggtggtcttaatgtcctgagaatcatcaatgaacca
actgctgctgcaattgcgtatggtcttgataagaaatcatcgagtacaggggagaagaat
gttctaattttcgaccttggaggtggtacatttgatgtttcgttattgactattgaagag
ggtattttcgaagtgaaggctactgctggagatactcatcttggaggagaagattttgat
aacaggatggtgaaccactttgtgcaagagtttaagaggaagaataagaaggatatcagt
ggaaatcctagagcattaagaaggttgaggactgcttgtgagagggcaaagaggactctt
tcatccactgcccagactacaattgaaattgattctctctatgagggtgttgatttctac
acgtctattactcgtgccagattcgaagagatgaacatggatttgttcaggaagtgtatg
gagcccgtcgagaagtgcttgagggatgctaagatggacaagagcagcgttcatgatgtt
gttctggttggtggatcaactcggattcctaaagtgcagcagttgttgcaggagttcttc
aatgggaaggaactctgcaagagcattaatcccgatgaagctgtggcttatggagcggct
gtgcaggctgccattttgactggtgcaagtaatgacaacttgaatcagattttgctgttg
gatgttgctcctctctcccttgggcttgagactgccggaggggttatgactactttgatt
gcaagaaataccaccattcccaccaagaaggagcaagttttctctacctactctgataac
caacctggagtgctgattcaggtctttgaaggggagagggcaagaaccagggataacaac
ttgcttggtaaatttgagctttctggaattccagctgcgcctcgtggtgtccctcagatc
actgtttgctttgatatcgacgcaaatggtattcttaatgtatctgctgaggataaaact
acaggaaagaagaacaaaatcacaatcacaaatgataaaggaaggttgtccaaggaggag
attgagaagatggtgcaggaggcagagaagtacaagacagaggatgaagaacacaagaag
aaaatcgagtcgaagaatggtttggagaattatgcttacaatatgaggaacaccatcaag
gatgagaatattgctgggaagttagcaccagaagacaagaagaagattgaggatgccatt
gaagctgctatccagtggcttgactccaaccagcttgcagaggctgatgaatttgatgac
aagatgaaagagctggagagtctctgcaacccagtcatcgccaagatgtatcaaggcggt
gctggacctgacatgggcggttttggtggcatggatgaggatggtccttcaatgggtggt
ggtgcaggacctaagattgaggaagttgattaa

  All links  
Ontology (9)   
   KEGG BRITE (9)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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