KEGG   Papaver somniferum (opium poppy): 113292955
Entry
113292955         CDS       T05758                                 
Name
(RefSeq) DNA polymerase epsilon subunit B-like
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03030  DNA replication
psom03410  Base excision repair
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113292955
   03410 Base excision repair
    113292955
   03420 Nucleotide excision repair
    113292955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psom03032]
    113292955
   03400 DNA repair and recombination proteins [BR:psom03400]
    113292955
Enzymes [BR:psom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113292955
DNA replication proteins [BR:psom03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113292955
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113292955
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE DNA_pol_D_N
Other DBs
NCBI-GeneID: 113292955
NCBI-ProteinID: XP_026397543
Position
7:123943595..123948489
AA seq 527 aa
MAVGATRKKVLRKFKLRGYILQTDALEEILSFLTQFEDAEDEAINVLLDEINKESLNSSV
LDRDSVHRVISLLHEAESAVEASPSSSNRSHFRIVDSFIIPKFCYDPIKKTFYERTGKLP
IHGEASSKAALYRDRFELLLQRLSRDPHFAKPAFDSEFNSSDSCEISPIQSLIGQTGRRW
IMGVISQLEDGHFYLEDMTAAVPVNLSNAKITTGFFVENTVIVAEGELLPSGTFQVNTCG
FPPLEARDESFSLLVGLDFFGCGAVPTEEMLRLSELEKKAVNDMFVIFSDIWLDDAETME
KLAIVLNGYENEAVVPSLFVFMGNFCSRPCNLAFNAFSSLRSQFGKLGEIIGAHTRLMEQ
SQFLFIPGPEDAGPSTVLPRPALSKYLTEELQKHVPNAIFKSNPCRIKFYTQEIIFFRQD
LLYKMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLRLYPSPH
TIVLGDRSEQKTFEYTGTTCFNTGSFSSDSTFAAYFPCMKKVELSAL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcagtgggagcaacaaggaagaaagtacttcgaaagtttaagttaagaggctacatc
ttacaaacagatgccctagaagagattttatcatttttaacccaatttgaagacgctgag
gatgaagcaatcaatgtccttctcgacgaaatcaataaagaatctctcaactcatctgtt
ctcgatagagattctgttcatcgagtcatcagtcttctacacgaagctgaatctgctgtt
gaagctagccctagttctagtaatcgttcccatttcagaattgttgattcctttataatc
cctaaattttgttacgatccaatcaagaaaactttctacgagcgtactggaaagcttcca
atacacggtgaagcttcctctaaagctgctttatacagagataggtttgagttgttgctt
cagaggctttctcgtgatcctcattttgcaaaaccggcttttgattctgaatttaatagc
tctgatagctgtgagatttctccaattcaatctctgattgggcagacggggaggagatgg
attatgggtgtaatctcccaattagaagatggtcatttctacttagaagatatgactgca
gctgtaccagttaacttatctaatgcaaagatcacaacaggtttttttgtggagaacact
gtaattgtagctgaaggagagctgctcccaagtggtacctttcaggtcaatacatgtggg
tttcccccattggaggccagggatgaatcattctctttacttgtagggctagactttttt
ggttgtggtgcagtcccaacagaggaaatgcttagactttcagagttggagaagaaggct
gtgaatgacatgtttgtcatcttttctgatatttggctggatgatgcagagactatggaa
aaactagccattgtactgaatggttatgagaatgaggcggtggttccttccttgtttgtc
tttatgggaaatttctgctctcgtccatgtaacctggcttttaatgctttctcaagtctc
agatcacaatttggaaagctgggagaaataattggggctcatacccgcttaatggagcaa
agccagttcctttttattccaggtccggaggatgcaggtccttcaacggttttgcccagg
cctgcgttatccaagtatctgacagaggagcttcagaagcatgttcccaacgccatcttt
aaaagtaacccttgcagaatcaagttttacacccaggaaatcatcttcttccgtcaagac
ctcctttataaaatgcgccgttcctgcctgattcccccttcaacagaagaaaccagtgat
ccttttgagcatcttgttgcaaccataactcatcaaagccatttatgtcccctgcctctc
actgttcaacccattatctggaattatgatcattgcctccgcctatatccatccccgcat
acgatagtgttgggggacagaagtgaacagaagacattcgaatacacaggcacaacgtgt
ttcaacaccggctccttctctagtgacagtacattcgcagcatactttccttgcatgaag
aaggttgaattgtcagccctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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