KEGG   Papaver somniferum (opium poppy): 113298399
Entry
113298399         CDS       T05758                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03420  Nucleotide excision repair
psom04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113298399
  09124 Replication and repair
   03420 Nucleotide excision repair
    113298399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:psom03051]
    113298399
   03400 DNA repair and recombination proteins [BR:psom03400]
    113298399
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    113298399
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      113298399
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE Dsc3_N Crinkler UBA_3 TECR_N Rad60-SLD_2
Other DBs
NCBI-GeneID: 113298399
NCBI-ProteinID: XP_026402920
Position
7:129181312..129186700
AA seq 376 aa
MKISVKNLKNAKFDIEVNPDDKVSDVKKSIETSQGSDVYPASQQMLIHQGKVLKDDTTLA
ENQVVENSFLVIMLTKTKSSYSGTPTTTTTPTGQVQSAASVPPAVAPASALPQPPPTLAS
APVPTSATAFRQGSDVYGQAASNLVAGNNLEQTIQEILDMGGGTWDRDTVVRALRAAFNN
PERAVDYLYSGIPEQPVVVPAPQAPTGQAGLPPAQAREPAQLGVPSTGPNANPLDLFPQG
LPNLETNAAAGGNLDFLRTNPQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQT
DFLRLINEPVEGEENIMEQLAAAMPQVAVTPEEQQAIERLEAMGFDRAVVLEVFFACNKN
EELAANYLLDHGHEYE
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgaagatttcagtgaaaaatctcaagaatgcaaagttcgatatagaagttaatcctgat
gataaggtgtctgatgtcaaaaaaagcatagaaacttctcagggatcagatgtttacccc
gcctcacaacaaatgcttatccatcagggaaaagttcttaaagatgacacaacgttggct
gaaaaccaagttgttgagaacagttttcttgttattatgttgactaagaccaaaagctca
tatagtggaactccaactacaacaaccacacctactggtcaggttcagtcagcagcttca
gtgcctcctgctgtggctccagcatcagccctgcctcaaccaccacctactcttgcatct
gctcctgttccaacttccgcaactgccttcaggcaaggatcagatgtatatggtcaagca
gcatcgaatcttgttgcagggaataaccttgagcaaactattcaggagattttggatatg
ggaggagggacctgggacagagataccgtagttcgtgcactccgcgctgctttcaacaac
cctgaaagagctgttgactatttatactcgggaattcccgagcaaccagttgtggtgcct
gcaccccaggctcctactggacaagctggactccctcctgcccaagctcgagaaccagct
cagttgggggttccctctactggtcccaatgcaaatccattagatctgtttccacagggc
cttcccaacttggagactaatgctgctgctggaggtaacttagacttcttacgcaccaat
ccacagtttcaagctctgcgagctatggtgcaagcgaacccacaaatcttgcagcctatg
cttcaagagcttgggaagcaaaaccctcagctggtgaggctcattcaggagcatcaaact
gatttccttcgccttatcaacgaacccgttgaaggagaggagaatataatggaacagcta
gctgcagcaatgccacaagtggctgtcacacctgaggagcagcaagctattgaacgtctc
gaggcgatgggttttgatagagcggttgtgctggaggtgttctttgcctgcaacaagaat
gaggagctcgctgctaattatctattggatcatggtcatgagtacgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system