KEGG   Papaver somniferum (opium poppy): 113302861
Entry
113302861         CDS       T05758                                 
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom00730  Thiamine metabolism
psom01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:psom00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    113302861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psom03009]
    113302861
Enzymes [BR:psom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     113302861
Ribosome biogenesis [BR:psom03009]
 Prokaryotic type
  GTPases
   113302861
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 ABC_tran AAA_29 AAA_21 nSTAND1 YNR034W-A-like AAA_16 IstB_IS21 AAA_22 Adeno_IVa2 cobW Septin VapE-like_dom Guanylate_kin AAA_18 AAA_15 AAA_23
Other DBs
NCBI-GeneID: 113302861
NCBI-ProteinID: XP_026407604
Position
8:123063034..123066292
AA seq 475 aa
MSTSIIPTTAKSSSSLPTICNKNVFFNNSFHIRNFNKLSTKFRVISMAAARQDVHQRRTQ
LNKNLLKAKDSVKELNQSSLSPVLDNNVIPQLLQNQAVGMVASAQANFMRVVVQSIKEVK
EEEEGKIGVELLCVVKAVLKKIKRRVLVGDKVLVGGIDWNDKRGMIENVYQRDSEIMDPP
VANVDHLLVLFSLEQPKIEAFALTRFLIEAESTGIPLTLALNKCELVDEKTRLEWESRLR
GWGYEPVFCSVDTRNGLDSLYFILRDQTTVLVGPSGVGKSSLINVLRSSQQVSDISEGDN
QSVNIEGSKWLEDQRVGVVSVKSGRGKHTTRHVSLLPISGGGYLADTPGFSQPTLLKATK
VSLPQLFPEIRKMIEDSGPTTCSFNDCLHVGEPGCVVTADWERYPYYLQLLDEIKTREEF
QKRTIGTKRESDVRYKVGEMGVIQVEPRLQLKKHRRQSRKRTNQSFLNELDDDDH
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcaacctcaatcattccaacaacagcaaaatcctcatcatcattaccaacaatctgc
aacaaaaatgtcttctttaacaactcatttcatattagaaacttcaacaaattatccaca
aaattccgtgtaatttcaatggcagcagctcgtcaggatgtacatcaaaggaggacacaa
ctgaataagaatttactcaaagcaaaagattcagtaaaagaacttaatcaatcatctcta
tccccggttctggataataatgttattccccagttgttgcaaaatcaagctgtgggtatg
gttgcatcagcccaagctaatttcatgagagtagtggttcagtcaattaaggaagttaaa
gaagaggaggaaggtaaaattggggtggaattattatgtgttgtgaaagcggttctgaag
aaaattaagagaagggttttagtaggtgataaggttttagttggaggtattgattggaat
gataaaagaggaatgattgagaatgtttatcaaagggattcagagattatggacccgcct
gttgctaatgttgatcatttattggttttgttttccttagaacaacctaagattgaagca
tttgcacttactaggttcttgattgaagctgaatctactggaattcctcttactttagct
ttaaacaagtgtgaacttgtggacgaaaagacacggttagaatgggaatcaaggcttcgt
ggatggggatatgaaccagtcttttgcagtgtggataccagaaatggattggactccctg
tatttcatcttgagagaccaaacaactgtgcttgtaggtccaagtggtgttggaaagtct
agccttattaatgtgttgagaagcagtcaacaagtttctgatatttcagaaggagataac
cagtctgtaaatattgaaggtagcaagtggttggaagatcaacgagttggtgtggtttca
gttaaaagtggtagaggaaagcatacaacacgacacgtttcattacttccaatatccggg
ggtggatatcttgctgatacaccagggttcagtcagcctacactgctgaaagcaacaaaa
gtatcgcttccgcaattattccccgagattagaaagatgattgaggatagtggccctaca
acatgctcattcaatgactgtctgcatgtcggtgagccgggatgtgtggtgacagcagac
tgggaaagatatccctactatcttcaattgcttgatgaaataaaaactagagaagagttc
cagaaaagaacaataggaaccaaaagagaaagcgatgtaaggtacaaagtgggggagatg
ggtgttatacaagtggaacctcgccttcagctcaaaaagcataggaggcaatcccggaag
cggacaaatcaatcattcctaaatgaattggatgacgatgatcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (37)   

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