KEGG   Papaver somniferum (opium poppy): 113310382Help
Entry
113310382         CDS       T05758                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
psom04141  Protein processing in endoplasmic reticulum
psom04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113310382
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113310382
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113310382
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psom01009]
    113310382
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113310382
   03009 Ribosome biogenesis [BR:psom03009]
    113310382
   03110 Chaperones and folding catalysts [BR:psom03110]
    113310382
   04131 Membrane trafficking [BR:psom04131]
    113310382
   03051 Proteasome [BR:psom03051]
    113310382
   03029 Mitochondrial biogenesis [BR:psom03029]
    113310382
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113310382
Protein phosphatases and associated proteins [BR:psom01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     113310382
Spliceosome [BR:psom03041]
 Complex B
  Other components
   Prp19 complex
    113310382
 Complex C
   Prp19-CDC5 complex
    113310382
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    113310382
Chaperones and folding catalysts [BR:psom03110]
 Heat shock proteins
  HSP70 / DNAK
   113310382
Membrane trafficking [BR:psom04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    113310382
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    113310382
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    113310382
Mitochondrial biogenesis [BR:psom03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    113310382
Exosome [BR:psom04147]
 Exosomal proteins
  Proteins found in most exosomes
   113310382
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl Hydantoinase_A FGGY_C YbaB_DNA_bd
Motif
Other DBs
NCBI-GeneID: 113310382
NCBI-ProteinID: XP_026414825
Position
9
AA seq 651 aa AA seqDB search
MAEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPVNTVFDAKRLIGRKVSDPSVQADMKLWPYKVTAGPAEKPVITVTYKGEEKQFSAEEI
SSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAA
AIAYGLDKKSSSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM
VNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTSI
TRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQEFFNGK
ELCKSINPDEAVAYGAAVQAAILTGASNDNLNQILLLDVAPLSLGLETAGGVMTTLIARN
TTIPTKKEQVFSTYADNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVC
FDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIEKMVQEAERYKTEDEEHKKKIE
SKNGLENYAYNMRNTIKDEKIAGKLAPEDKKKIEDAIEAAIQWLDSNQLAEAEEFDDKMK
ELESLCNPIIAKMYQGGAGPDMGGFGGMGEDGPSMGGAGSTGAGPKIEEVD
NT seq 1956 nt NT seq  +upstreamnt  +downstreamnt
atggctgaaggacctgcgattggtatagatttaggcacaacttattcatgtgttggagta
tggcaacatgatagagttgagatcattgctaatgatcaaggaaacagaacaacaccttca
tatgttgcttttactgatactgagcggttgatcggtgatgctgctaagaatcaggttgcc
atgaaccctgtcaacaccgtctttgatgcaaagcgtttgattggaagaaaggtttctgat
ccatcagttcaggctgatatgaagctatggccttacaaggttacagctggaccagctgaa
aaacccgtcattactgtcacttacaaaggcgaagagaagcaattttcagctgaagaaatc
tcatctatggttctcatcaagatgcgcgagattgcagaggcgtaccttggttcttctata
aagaatgcagttgttaccgtacctgcatacttcaatgactcgcagcgtcaagctacaaag
gatgctggttccattgctggtcttaatgtcctgagaatcatcaacgaaccaactgctgct
gcaattgcttatggtcttgataagaaatcatcgagtacaggggagaagaatgttctaatt
tttgatcttggtggtggtacatttgatgtttccttgctgactattgaagagggtatcttc
gaagtgaaggctacggctggagatactcatcttggaggagaagattttgacaacaggatg
gtcaatcacttcgtgcaagagtttaagaggaagaataagaaggatatcactggaaatcca
agggcattaagaaggttgaggacagcttgtgagagggctaagaggactctttcatccact
gcccagactacaattgaaattgattctctctatgagggtgttgatttctacacatctatt
actcgtgccagattcgaagagatgaacatggatttgttcaggaagtgtatggaaccagtc
gagaagtgcttgagagatgctaagatggacaagagcagtgttcatgatgttgttctggtt
ggtggatcaactcggattcctaaagtgcagcaactgttgcaggagttctttaatggcaag
gaactctgcaagagcattaatcccgatgaagctgtggcttatggagcggctgtgcaggct
gccattttgactggtgcaagtaatgataacttgaatcagattttgctgttggatgttgct
cctctctctcttgggctcgaaactgccggaggggttatgactactttgatcgcaagaaac
accaccattcccaccaagaaggagcaagttttctcaacctacgccgacaaccaacctgga
gtgctgattcaggtgtttgaaggggagagggcaagaaccagggataacaacttgcttggt
aaatttgagctttctggaattccacctgcgcctcgtggtgtccctcagatcactgtttgc
ttcgacattgacgcaaatggtattcttaatgtatctgctgaggacaaaactacagggaag
aaaaacaaaatcaccatcacaaacgataaaggaaggttgtccaaggaggagattgagaag
atggtgcaggaggcagagaggtacaagacagaggatgaggaacacaagaagaaaatcgag
tcgaagaatggtttggagaattatgcttacaatatgagaaataccatcaaggatgagaag
attgctgggaagttagcaccagaagacaagaagaagattgaggatgccattgaagctgct
atccagtggcttgacagcaaccagctcgcagaggcggaggaatttgatgataagatgaag
gagctggagagtctgtgcaacccaatcatcgccaagatgtatcaaggtggtgctggacct
gacatgggtggttttggtggcatgggcgaggatggtccttcaatgggcggtgctggtagc
actggtgcaggacctaagattgaagaggttgattaa

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