KEGG   Papaver somniferum (opium poppy): 113318041
Entry
113318041         CDS       T05758                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113318041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113318041
   03036 Chromosome and associated proteins [BR:psom03036]
    113318041
Spliceosome [BR:psom03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113318041
 Complex B
    113318041
 Complex C
   U2 SnRNP specific factors
    113318041
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    113318041
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 113318041
NCBI-ProteinID: XP_026421947
Position
10:complement(16779065..16783329)
AA seq 1279 aa
MDPEIAKTQEERKKMEQQIASLSTVTFDTEFYDSTGNRYEGYESSIAVTEEEQTVDPSLS
DVPRRLASYTAPQSLMKDIARSAEEHNNNNNNGSGLNETSRRIIDREDEYRRRRLNQVLS
PDRVDAFALGDKTPDPSVRTYAEIMKEESLKREREETLREIAKKKKEEEEDKERGGGRKV
EERERDEVPAPVPKRRNRWDQNQDVDGASKKAKTSSSDWDMPDSTPGIGRWDATPTPGRI
GDATPSLSRRNRWDETPTPGRVADADATPSAGVTPAATPSGMTWDSTPKLAGLATPTPKR
QRSRWDETPLTIGSATPMLGATPAGPYTPGVTPLGGVELATPTPGAIRQAITPEQYNLMR
WEKDIEERNRPLSDEELDSMFPQEGYKILDPPASYVPIRTPARKLLQTPTPLGTPLYHIP
EENRGQQFDVPKEAAGGLPEMKPEDMQYFAPLLSEVDEETLSPDEQKERKIMKLLLKVKN
GTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDEL
VRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRN
TTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSL
VEIIEHGLVDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAF
LKAIGFIIPLMDAIYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYI
RSDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRR
MVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRV
KPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEE
YPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADR
GAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQE
RQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDY
IYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPH
VINAVMEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYP
VLEDEESNVFSRPELVMFV
NT seq 3840 nt   +upstreamnt  +downstreamnt
atggatcctgagatagctaaaacccaagaagagagaaagaagatggagcaacaaatcgct
tctctctcaacagttacttttgatactgaattttatgatagtactggaaatcgatatgaa
ggttatgaaagttcaattgctgtaactgaagaagaacaaactgtagatcccagtttatct
gatgttcctagaagattagcttcttatactgcacctcaatcattaatgaaagatattgca
agaagtgctgaagagcataataataataataacaatggctcggggttgaatgaaacatcg
agaagaattattgatagagaagatgagtatagaaggagaagattgaaccaagtgctctca
cctgatcgagttgatgcttttgcattgggagataaaactcctgatccatctgtcaggact
tatgctgaaattatgaaggaagaatctttgaaaagagagagagaagagactttgagagaa
attgctaagaagaagaaggaagaagaagaggacaaggagagaggcggtggtaggaaggtt
gaagagagagaaagagatgaggtacctgctcctgtacctaaaagaaggaataggtgggat
caaaatcaggatgttgatggtgctagtaagaaagccaagacttcttcatctgattgggat
atgccagattcaactccagggattggaagatgggatgcaacacctactccaggaaggatt
ggagatgcaactccttcgctatctagaaggaataggtgggatgaaacaccaacccctggt
cgggttgcagatgcagatgctactccatctgcaggtgtaactcctgctgctactccctcg
ggtatgacttgggattctacacctaaacttgctggtcttgctactccgactcccaaacgt
caaagatcaagatgggacgagactcctttgaccattggcagtgccactccaatgctcggt
gcaactccagctggtccgtacactccaggagttacacctcttggaggtgttgagctggct
accccaactcctggggctattcgccaagcaatcacacctgaacagtacaatttgatgaga
tgggagaaggatattgaagagagaaataggccattaagcgatgaggaacttgattcaatg
tttccacaagaagggtacaaaattttggatcctccagcatcttacgttccaataagaact
ccggccaggaagcttcttcaaactcccactccgttgggtaccccactttatcatatccca
gaagagaaccgtggccagcaatttgatgttccaaaagaagcagctggagggttgccagag
atgaaaccagaggatatgcagtattttgcaccattgctgagtgaagttgatgaagaaacg
ttgtcgcctgacgagcagaaagagaggaaaatcatgaaactactgctaaaggtcaagaat
ggaacacccccacagagaaaaactgcattgagacagttgactgataaagcgcgtgaattt
ggtgcaggcccactcttcaacaggatattgccattacttatgcaaccgacgttggaagat
caagaacgacatcttctagttaaggttattgatagagttttgtacaagttggatgagctt
gttagacctttcgttcacaaaatccttgtggtgattgagcctcttctgatcgatgaggac
tattatgctcgtgttgagggaagagaaattatttccaacctaagtaaagctgctggtttg
gctactatgattgctgcaatgaggcccgatattgataacattgatgagtacgtaaggaac
acaactgcaagggctttcagtgttgttgcttctgctctgggaattccagcgctgcttcct
ttcttgaaagctgtctgtcagagtaagaaatcttggcaagctcggcacactggtatcaag
attgttcagcagattgcgatcttaattggttgtgcagtacttcctcatttgaggtctctt
gtggaaatcatagaacatggtcttgttgatgaaaaccagaaggtcaggaccattactgcg
ctgtcgttggctgccctggctgaagcttctgctccctatggtattgaaagttttgattct
gtcctgaagcctttgtggaagggtatcagatcacacaggggtaaggttttggctgccttc
ttgaaagcaattggttttatcattcccctcatggatgcgatatatgctagttactatacc
aaggaagtgatgttcatattgatccgtgagttccagtctcccgatgaagaaatgaagaaa
attgtgctcaaagtcgtgaagcagtgtgttagtacagaaggtgttgaagctgattatatc
agaagtgatattcttccggagtttttcaagaacttttgggtgagaagaatggcactggac
cgtagaaactataggcagctagtggaaaccactgtggagatcgcaaacaaggtcggtgtt
gctgatatagtgggaagaattgttgaggatcttaaagatgagagtgaaccttacagaaga
atggtgatggaaactattgagaaggtggttgcgaacttgggtgcatctgatatcgatgca
cgcttggaagaacttcttattgatggtatactgtacgctttccaggagcaaactagtgac
gatgctaatgttatgttgaatggatttggggctgttgtgaatgccctggggcagagagtg
aaaccctatcttcctcagatatgtggtaccattaaatggcgtttgaacaacaagagtgcg
aaggttagacaacaagcagcagatctcatttctaggattgctgttgtgatgaagcaatgt
caagaagagcagctgatgggtcatctcggtgtcgtcttgtacgagtacttgggagaagag
taccctgaagttctgggatccattttaggagctctgaaggcaattgtgaatgttatcgga
atgacaaagatgacaccaccaatcaaagatctgcttcctcgattgactcctattttgaag
aatcgacatgaaaaggttcaagagaactgcattgatcttgtcggtaggattgccgatcgt
ggagctgagttcgttcctgcgagggagtggatgagaatatgttttgagcttcttgagatg
ctaaaagcccacaagaaaggaattcgaagggctactgtcaacacatttggatacatcgcg
aaagccattggaccccaagatgtcctggcaacattgttgaacaacctcaaagtgcaggag
cgtcagaaccgtgtatgcacaactgtagctattgcaatagttgcggaaacttgttctcca
ttcacagttctgccagctcttatgaacgagtatcgtgtgccagaactgaatgtgcagaat
ggcgttttaaaatcactttctttcttgttcgagtatattggcgagatggggaaggattat
atatatgctgtgactcctcttcttgaagacgcgttaatggatagggatctggttcacagg
caaacggcggcctccgctgtaaagcacatggctttaggtgtggcggggttaggctgtgaa
gatgctttagttcatcttctgaattatgtctggccgaatatatttgagacttctccccat
gttattaatgctgtaatggaagcaattgaaggaatgagggttgccttaggggctgctgca
attttgaattactgtttgcagggactttttcatccagcacggaaggtcagggaggtgtat
tggaagatttataactcgctgtacattggagcgcaggatgcccttgtagctgcgtacccg
gtgttggaggatgaggagagcaacgtatttagcaggccggagttggtgatgtttgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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