KEGG   Papaver somniferum (opium poppy): 113322113
Entry
113322113         CDS       T05758                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic-like
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113322113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psom03400]
    113322113
Enzymes [BR:psom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     113322113
DNA repair and recombination proteins [BR:psom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     113322113
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 COMM_domain SAP_new25
Other DBs
NCBI-GeneID: 113322113
NCBI-ProteinID: XP_026425920
Position
11:complement(39651875..39660794)
AA seq 541 aa
MPLNCASSCLTYAYFSQFVSSFSGFRCDYPGFAATSRNLSFKVKARVKTDRLISSSLSTS
PNMSSDNKHKKLKQSTTDVVMKNDEVLEIKNVKESGSIELEGLTFHQLRTMSRNYGIPAK
GSKHDLLLALKEFMDNEKDVDFVDTLEHVDSEKKLRDPENAASGSQNTTPDESSGNQQKK
RRRKTTLENGANIAVTAETVITEQKLSIATNEVPVLDTKPSRAQKKGSTKSVKQDEGSTA
VSGNQSEPWTMLAHKKPEPGWIPYNPRTMRPPPLADGIKSVKLISWNVNGLRALLKLEGF
SALQLAKRENFDVLCLQETKLQEKDVEDIKRCLIEGYDNSFWTCSVSKLGYSGTAIISRI
KPVSVRYGLGIQDHDSEGRLVTVEFDTFYLLNGYVPNSGDGLKRLSYRVTQWDSSLANYM
KELEKSKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTIEERQSFETNFLSKGYVDTFRRQ
HPGVVGYTYWGYRHNGRVTNKGWRLDYFLASESLADKVHDSYILPDVLGSDHCPIGLILK
L
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgccactaaactgcgccagttcctgcttaacgtatgcctacttctctcaatttgtttct
tctttttcagggtttcggtgtgattatccaggatttgcagcaacttcgagaaacttgagt
tttaaagtgaaagctagggtgaaaactgatcgtctcatttcatcatcactgtcgacatca
ccaaacatgtcctctgataataaacacaagaagctgaagcaatcaactacagatgttgtt
atgaaaaacgatgaagttttggaaataaaaaatgttaaggagagcggttcaattgaactc
gaaggattgacgtttcatcaactgagaaccatgtcaaggaattatggtatccctgctaaa
ggttctaagcacgaccttctgctggccttgaaggaattcatggataatgagaaagatgta
gattttgtcgataccttagaacatgtggattctgagaagaaactaagggaccctgaaaat
gctgcatcaggaagccaaaacactaccccagatgaatcctctggaaaccaacagaagaag
aggagaagaaaaacaaccttagagaatggcgctaatattgctgttacagcagaaactgtc
ataacagagcaaaagttatctatcgcaacaaatgaggttccagtgctagatacaaagcct
tcccgagctcagaaaaagggaagtaccaaaagtgtgaaacaagatgaaggatccactgct
gtgtctggaaatcagagtgagccttggacaatgcttgcgcacaaaaaaccagaaccagga
tggataccatataatccaagaacgatgaggcctccaccgcttgcagatggtataaaatct
gttaaattaatctcttggaatgttaatggcttaagagctttgttaaaattggagggcttc
tccgcgctgcaactcgcgaaacgggagaactttgatgtgttgtgcttgcaagaaaccaaa
cttcaggagaaggatgtcgaggatatcaagaggtgccttatagagggctacgataatagc
ttctggacttgcagtgtttcaaagcttggttactctggtacagctatcatttccaggata
aagccagtgtcagtcagatatggactaggcatacaggatcatgacagtgaaggacgcctt
gtgacagtggaatttgatacattttacttactaaacggatatgtcccaaattctggggat
ggtttgaaaagactgtcgtacagggttacacagtgggattcatctcttgctaactacatg
aaggaattggaaaagtcaaagcctgtaattctgactggggatctgaattgtgcacatcag
gagatagacatttataaccctgctggaaatcggagaagtgccgggtttacaattgaggag
aggcaatcatttgagacaaacttcttgtcgaaaggttatgttgatacattcaggcgacaa
catcctggcgttgttggttatacgtactggggttataggcataatgggcgggtgacaaat
aaaggatggcgtcttgactattttctggcttcagaatctctagcagacaaagtacacgac
tcttacattcttccagatgttcttggtagcgaccactgcccaattggtctcattctcaag
ctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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