KEGG   Papaver somniferum (opium poppy): 113323032
Entry
113323032         CDS       T05758                                 
Name
(RefSeq) nuclear pore complex protein NUP88-like
  KO
K14318  nuclear pore complex protein Nup88
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113323032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113323032
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113323032
SSDB
Motif
Pfam: Nup88 Spc7 MscS_porin ATG16
Other DBs
NCBI-GeneID: 113323032
NCBI-ProteinID: XP_026427050
Position
11:complement(114807381..114812219)
AA seq 816 aa
MRFSFEVTETGSNNKTLTPSPPTKTPPSSSKEQIEWIPLQSHPIFTTTTITTTAGGGVRN
LIAYDKKASRLYLWESHTQSLHRISIRLGDPDDPTSVLASSSSKVLQPDVHLSFVVSNIS
INRNGSALFLSGDHGLSVMYLFGRNSAKDSTIICRTVSVGSQYYYENHNSIRTLQILWHP
ISDTHLGILSSDSVFRLFDLSSDLEKPEQEYYLQPVEPEKCRNAASICPVGFSFGGEHLW
DRFTVFILFSDGSIYILCPVVPFGSVHRWDSIWEIYNDAHLFGLKASNSRAVSYSSLAIA
WLKATFPQLVSQPAGGGSSVALRAHPYVPFDASLSLQGPLRKVCHGDEEDSELQGTTCEG
RAVGILYNIISKDSVLVTSWSSGQLQIDALADEIQPVWNVGNPPRVRVDSHDHILGVAMI
CESSLGDRPVVKLDQPLDHTVWLGNSPPLLSLAVVDLALPENIDNGSLISMFADPFIPER
IYCLHGGGVDSIVIHFLPFTSQASGKDEVMKAPSVYSILSTSLGETSFPSLLSGFLALED
SFGYSWIVAVTSSQECIVLETKDWNISLPVHVDREKKDSIDEFQEKDTPVVLSKELLDGP
NVVLIPQASPNLRALVADSIEGRAALHQYSKLFHENYVEYAHKVWFELKHHGGYLEKVIS
KQKERLHNAQQDLSKVEERQPSLDDRINRALEVHCSLEDRLRTLRNLPRGHKKPLSRAEL
DFKTELDRFTGLELGALRSSIEALNARARKFTQSSKSSGGSKSPHRQLPGRRKNPVPESQ
VSQLRSAVEKLSLVNSETSKKVKLVESALSKIESKE
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgagattcagtttcgaagtaacagaaacaggcagcaacaacaaaaccctaactccatcc
ccaccaactaaaacaccaccatcttcatctaaagaacaaattgaatggattcctctacaa
tctcaccctatttttacaaccaccaccatcaccaccaccgctggtggtggtgtaagaaac
ctaattgcttatgataaaaaagcatctcgtctttacttgtgggaatctcatactcaatct
ctacatcgtatctccattcgtcttggtgatcctgatgaccctacttctgttcttgcctct
tcctcttccaaggtattgcaaccagatgttcatttgagttttgttgtcagcaacatttct
attaataggaatggatcagcattatttctttctggtgatcatggtctttctgttatgtat
ctatttggaagaaattcggcgaaagatagtacgattatatgcaggactgtttcagttggg
tctcaatattattacgaaaaccacaattcgatacgaacattgcaaattttgtggcaccct
atttcggacactcatttgggtatcctttcttctgactcagttttcagactttttgatttg
tcttcggatctggaaaagccggagcaggaatattacttacagccggtcgaacctgaaaaa
tgtcgaaatgctgcatctatctgtcctgtgggattttcatttggaggtgaacacttgtgg
gataggtttacggtgttcattttgtttagtgatggttcaatctacattctctgcccagtt
gttccctttggaagtgtgcacagatgggattctatttgggaaatttataacgacgcgcac
ttatttgggctgaaggcgtccaactcaagggcagttagttactctagtttggctattgct
tggttgaaagcaacatttcctcagttggtgagtcaaccagcaggaggaggaagttcagtg
gcactgagagcccatccctatgtaccgtttgatgcttctctttcgttacaggggcctctc
cgtaaagtctgccatggtgatgaagaagattctgaactacagggtacaacatgtgaaggt
agggcggtggggattctgtataacataatcagcaaggattcagtcttggtgacttcctgg
agcagtgggcagttgcaaatagatgctctagctgatgaaattcaacctgtttggaatgtc
ggtaacccgcctcgtgtacgtgttgattctcatgaccatatccttggcgttgccatgatt
tgtgagtcaagcctgggagatcgtcctgttgtaaagcttgatcaaccactagatcatact
gtttggttaggaaactcaccccctttgttgagtttggctgttgtggatttggctttgcct
gaaaatatagataatggttcccttatttcgatgtttgctgatcccttcatcccagaaaga
atatactgcctgcacggtggtggtgtagattcaatagttatacattttctaccttttaca
agccaggcaagtgggaaagatgaggtcatgaaggctccttctgtgtattcaattctgagt
acatccctaggcgaaactagcttcccatccctgctttctggttttctggctctagaggat
tcatttggttattcttggatagtggcagtcacctcctctcaagaatgtatagtattagag
acgaaagattggaatatttcgttaccagttcatgttgatagggaaaagaaagatagcatt
gacgagttccaagagaaagatactccagttgttttgagcaaggaactcctggatggacct
aatgtggttcttattcctcaggcctcacctaatttacgcgctcttgttgctgattccatt
gaaggtcgagcagctctccatcaatactctaagcttttccatgagaattacgttgagtat
gcccacaaggtctggtttgaacttaaacatcacggaggttacctggagaaagtgattagt
aaacaaaaagaacgtttacataatgcacagcaggatctttcaaaggtcgaggagagacaa
ccaagcttggatgataggattaaccgtgcattagaggtacattgcagtctagaagaccgc
ctacggacattgagaaacttgcccaggggccacaagaaaccactgtctagagcagagctc
gacttcaaaactgagcttgacaggtttaccggattggagttgggtgctttgcgttcatct
attgaagctctaaatgcgagggctagaaagttcacacaatcctcaaaaagtagcgggggc
tcaaagtctccacatagacagttaccaggcaggaggaagaatcctgtcccagaatcccaa
gtttcccagcttagatcagctgtagagaaactctcactagtgaacagtgagacttcgaaa
aaggttaaattagtcgaatctgctttgagcaaaatagagagcaaggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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