KEGG   Papaver somniferum (opium poppy): 113325338Help
Entry
113325338         CDS       T05758                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
psom04141  Protein processing in endoplasmic reticulum
psom04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113325338
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113325338
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113325338
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psom01009]
    113325338
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113325338
   03009 Ribosome biogenesis [BR:psom03009]
    113325338
   03110 Chaperones and folding catalysts [BR:psom03110]
    113325338
   04131 Membrane trafficking [BR:psom04131]
    113325338
   03051 Proteasome [BR:psom03051]
    113325338
   03029 Mitochondrial biogenesis [BR:psom03029]
    113325338
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113325338
Protein phosphatases and associated proteins [BR:psom01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     113325338
Spliceosome [BR:psom03041]
 Complex B
  Other components
   Prp19 complex
    113325338
 Complex C
   Prp19-CDC5 complex
    113325338
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    113325338
Chaperones and folding catalysts [BR:psom03110]
 Heat shock proteins
  HSP70 / DNAK
   113325338
Membrane trafficking [BR:psom04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    113325338
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    113325338
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    113325338
Mitochondrial biogenesis [BR:psom03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    113325338
Exosome [BR:psom04147]
 Exosomal proteins
  Proteins found in most exosomes
   113325338
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 UT Pec_lyase RD3
Motif
Other DBs
NCBI-GeneID: 113325338
NCBI-ProteinID: XP_026429321
Position
11
AA seq 311 aa AA seqDB search
MYKEAIGKQENKKLAVVMQEAGQSSLSENLLRLPFPRKCSLPVFTPPFTLTSTLLLLDVA
PLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLG
KFGLSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSMEEIEK
MVQEAEMYKTEDEEHKKKIESKNGLENYAYNMRNAIKDEKIAGKLDPADKKKIEDAIEAA
IQWLDTNQLAEAEEFDDKMKELESLCNPIIAKMYQVGGAGPDMGGFGGMDEDGPSMGGAG
SGAGPKIEEVD
NT seq 936 nt NT seq  +upstreamnt  +downstreamnt
atgtataaagaagctatagggaagcaggagaacaagaagttggcagtggtcatgcaagaa
gcaggacaatcttccttatccgaaaatctattaagattgccattcccaaggaagtgctcc
ctaccagtgttcacacccccgttcacattgacttctacattgttgctgttggacgttgct
cctctctcccttggacttgagacagctggaggggttatgactactttgattccaagaaac
accactattcccaccaagaaggagcaagttttctctacctattcggacaaccaacctgga
gtgctgattcaggtgtttgaaggggagagggcaagaaccagggataacaacttgcttggt
aaatttgggctttctggaattccacctgcgcctcgtggtgtccctcagatcactgtttgc
ttcgacatcgacgcaaatggtattcttaatgtatctgctgaggacaaaactacagggaag
aagaacaaaatcacaattacaaacgataaaggaaggttgtccatggaggagattgagaag
atggtgcaagaggcagaaatgtacaagacagaggatgaagagcacaagaagaaaattgaa
tcgaagaatggtttggagaattatgcttacaatatgaggaacgccatcaaggacgagaag
attgctgggaagttggatccagctgacaagaagaagattgaggatgccattgaagctgcc
atccagtggctcgacaccaaccagcttgcagaggcggaggaatttgacgataagatgaaa
gagttggagagtctctgcaacccaatcattgctaagatgtatcaagttggtggtgctgga
cctgacatgggtggttttggcggcatggatgaggatggtccttctatgggtggtgctggt
agtggtgctggacccaaaatcgaggaagtcgattaa

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