KEGG   Papaver somniferum (opium poppy): 113344738
Entry
113344738         CDS       T05758                                 
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113344738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113344738
Spliceosome [BR:psom03041]
 Complex C
  Other components
   Step II factors
    113344738
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N Helicase_C AAA_22 DEAD S1 AAA_19 nSTAND3 ABC_tran AAA_30 AAA_16 TsaE Sigma54_activ_2 T2SSE PhoH SLFN-g3_helicase Flavi_DEAD
Other DBs
NCBI-GeneID: 113344738
NCBI-ProteinID: XP_026444458
Position
Unknown
AA seq 1225 aa
MAELDRVTKGLKELEYLSLVSKVCTELESHLGFSDKVLAEFITEIGRDAESVDEFDSELK
NKGAEMPDYFVRTLFTIIHAILPTKSKKEDDEPVFKSLSIADGKARVKELEKEIEREARE
RQREEDESKRKERDRDRDRDNNDRHRDRDGRDGGRGGRDRDGRDGGSGGRDRDGGRDREA
DYRSGGGGRDRHRDRDRYDERDDRRGERFRGEEDDQGYNRRDDRGRERDHGRGGGGRDRG
RRRDENYDVNRGDEDYGDEKIDKRQSEPELYHVYAGRVAKVMDTGCFVSLNDFREKEGLV
HVSQMATRRVANAKEFVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTAEDE
SHRTNPQGSNRGPNSKVGISGIRILEEDEDTVPSRRPSKRMSSPEKWEAKQLIASGVLDA
SEFPNFDEDGEPGMLYQEEGGEEELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSL
SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA
YDMPEWKKDAYGKALTFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG
KTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
PDTVIKYMTDGMLLREILIDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLLNRRPDLRL
IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEIMYTKQPESDYLDASLITVLQIHLTEPE
GDILLFLTGQEEIDHACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKR
KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLIITPISQASAKQRAGRAGR
TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGSTTLQMKAMGINDLLSFDFMDPPSPQA
LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPMCKMLLASVDLGCSDEILTIIAMIQ
TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
RAQDVRKQLLTIMDRYKLDVVCAGKNFTKIRKAIAAGFFFHASRKDPQEGYRTLVENQPV
YIHPSSAVFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKSADPTKMSKRK
RQERIEPLYDRYHEPNSWRLSKRRA
NT seq 3678 nt   +upstreamnt  +downstreamnt
atggcggaattagacagagtaacaaaaggtttgaaggaactggaatacctctcacttgta
tccaaggtatgtaccgaactcgaatcgcatctaggtttttcagacaaagtattagccgaa
ttcataactgaaattggtcgtgatgctgaatctgttgatgaatttgattctgaattgaaa
aacaaaggtgctgagatgcctgattatttcgttcgtacactgtttacaattattcatgct
attttaccgactaaatctaagaaggaagatgatgagccggttttcaaatctctttcgatt
gctgatggtaaagctagggttaaagaattagaaaaagagattgagagagaagctagagaa
aggcagagagaagaggatgagagtaaacggaaagaaagagatcgagatagagaccgagat
aataacgataggcatcgagatagagatggtagagatggtggtagaggaggtagagataga
gatgggagagatggtggtagtggaggtagagatagagatggtggtagagatagggaggcg
gattatcggagtggtggtggtggaagggataggcatagagatagagatagatatgatgaa
agagatgatagaagaggggagagatttagaggggaagaggatgaccaaggttataatagg
agggacgatagaggaagggaaagggatcatggtcgtggtggtggtggtagagacagggga
aggaggagggatgagaattatgatgttaatagaggagatgaagattacggagatgaaaag
attgataagcgtcaaagtgagcctgaattgtaccatgtgtatgctggtagagttgcgaag
gtgatggatacagggtgttttgtgtcgttgaatgatttcagagaaaaagagggtttggtt
catgtatcacagatggctactcgaagggttgctaacgctaaagaatttgtgaaacgggat
caaagtgtgtttgttaaggtgatttctttgtcgggacagaagatgagtttatcgatgagg
gatgttgatcaggatactgggaaagatcttatacctattaaaaagactgctgaggatgaa
tcgcacaggacgaatcctcaaggttcaaatcgtggtccgaattctaaagtggggatttca
gggattaggatcttggaagaggatgaggatactgttccttcacgccgtccatcaaagcga
atgagctcaccagaaaaatgggaagcaaaacagttgattgcttctggtgtgttggatgct
agtgagtttcctaattttgatgaagatggggagcctggaatgctttatcaagaagagggt
ggcgaggaagagctcgagattgagctgaatgaagatgaaccagcgttcttgcaagggcag
agtcgatactctatggatatgtcaccagttaagatattcaaaaatcctgaaggttcttta
agtcgtgcagcagctcttcaatcagctctgataaaggagcgtagagaagttcgggaacag
cagcagcggacaatgcttgattctatcccaaaggatctcaatcgaccatgggaggaccca
atgccggagacgggagaaagacatcttgcacaggagttgagaggagttgggttatcagct
tacgatatgcctgaatggaagaaggatgcctatggaaaagcactgacatttggacagaga
tccaagctctccctccaggaacaaaggcagagtctaccaatatacaaattgaagaaagag
ctggttcaagctgtgcacgataaccaagtactggttgttattggagaaacaggttcagga
aagacgactcaagtgactcagtatctcgccgaggctggttacacaaccaaaggtaaaatt
gggtgtacacaacctcgtagggttgctgctatgtcagtagcgaagagggtggccgaagaa
tttggttgccgtttgggtgaagaagttggttatgccatcaggttcgaggactgcactgga
cctgatactgttatcaagtatatgactgacggtatgcttcttagggagattttgattgat
gaaagcctctcccagtactctgttattatgcttgatgaagctcatgagaggacgatccat
actgatgtcctttttggtttactcaagcaactcttgaatcgaagacctgaccttcggttg
attgttacatctgccactctagatgctgagaagttttctggttacttcttcaattgtaat
atcttcaccattcctgggagaacctttccggttgagatcatgtacacaaaacagccggag
agtgattatttggatgcgtcattgatcactgtgctgcagatccacttgacagaacctgag
ggtgatattcttctcttcttaactggtcaggaggaaattgatcacgcttgtcagtccctg
tatgagagaatgaaagggctcgggaaaaacgtaccggagctgattatcttgcctgtttac
agtgctcttcctagtgaaatgcaatcaagaatatttgatcctgctcctcctgggaagagg
aaggtggtcgtagctactaatattgcggaggcatctttgacaatagatggtatattctat
gtcattgatcctggatttgcaaagcagaatgtgtataacccgaagcaagggcttgattca
cttatcatcactcccatctcacaagcatctgctaagcaacgagctggacgtgctggtcgt
actggacctgggaaatgttatcgactgtatactgagagtgcttatcgtaatgagatgtct
cctacttccataccagaaatacaaaggataaaccttggatctactactctgcaaatgaag
gcgatgggtatcaatgatctactttcttttgattttatggatcctccttcaccccaagct
ctaatatctgccatggagcagttatacagtctaggcgccttggatgaagaggggcttctg
accaagttgggtagaaagatggcagagtttccacttgatcctcctatgtgtaagatgctc
ctcgcaagtgtcgacctcggatgcagtgatgagattttaacaatcattgccatgattcag
acggggaacatcttttacaggcctagagagaagcaagcacaagcagatcagaagagggca
aagttttttcagcctgagggagatcatctcacgcttcttgctgtgtatgaggcatggaag
gcgaagaatttttccggaccatggtgctttgaaaactttgtccagtcgagatctctgagg
agggcgcaagatgtgaggaaacaacttctcaccattatggacaggtataagttggatgtt
gtatgtgctggaaagaatttcacgaagataagaaaggccattgcagcaggattcttcttc
catgcatctagaaaggatccccaggagggttacaggacactagtcgagaaccagccagtt
tacattcaccccagcagtgctgttttccagcgtcagccagattgggtgatctaccacgag
ctggtaatgactacaaaggagtacatgcgtgaggtaacagtgattgaccctaaatggcta
gtcgatttggccccgagattctttaaatctgcagatccgacaaagatgagtaaaaggaag
cggcaggagagaattgagccattgtatgatagatatcatgagccaaattcatggcgttta
agtaaacgtcgtgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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