KEGG   Papaver somniferum (opium poppy): 113344774Help
Entry
113344774         CDS       T05758                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
psom04141  Protein processing in endoplasmic reticulum
psom04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113344774
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113344774
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113344774
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psom01009]
    113344774
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113344774
   03009 Ribosome biogenesis [BR:psom03009]
    113344774
   03110 Chaperones and folding catalysts [BR:psom03110]
    113344774
   04131 Membrane trafficking [BR:psom04131]
    113344774
   03051 Proteasome [BR:psom03051]
    113344774
   03029 Mitochondrial biogenesis [BR:psom03029]
    113344774
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113344774
Protein phosphatases and associated proteins [BR:psom01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     113344774
Spliceosome [BR:psom03041]
 Complex B
  Other components
   Prp19 complex
    113344774
 Complex C
   Prp19-CDC5 complex
    113344774
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    113344774
Chaperones and folding catalysts [BR:psom03110]
 Heat shock proteins
  HSP70 / DNAK
   113344774
Membrane trafficking [BR:psom04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    113344774
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    113344774
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    113344774
Mitochondrial biogenesis [BR:psom03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    113344774
Exosome [BR:psom04147]
 Exosomal proteins
  Proteins found in most exosomes
   113344774
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl DDR FGGY_C StbA Hydantoinase_A
Motif
Other DBs
NCBI-GeneID: 113344774
NCBI-ProteinID: XP_026444477
Position
Unknown
AA seq 629 aa AA seqDB search
MVGRIEGVGGGTTAIGIDLGTTYSCVAVWQNGRVEIIANDQGNRTTPSYVAFTDDQRLIG
DAAKNQVALNPINTVFDAKRLIGRKICDSFVQNDIKLWPFKVIAGADERPMIQINYKGKD
MQFSAEEISSMVLIKMRETAENYLGSTVKNAVITVPAYFNDSQRQATRDSGIIAGLNVLR
IISEPTAAAIAYGLDKKTTSGRVKNVLIFDLGGGTFDVSILTISGSVFNVKATSGDTHLG
GEDIDNRMVNHFVQEFKKKYHKDISGNPKALRRLRTSCERAKRTLSSTTRTTIEVDSLHE
GIDFQASITRARFEELNLDLFRKCMEPVQKCLEDAKMDKTAVHEVVLVGGSTRIPKVQSL
LQDFFNGKELSKNINPDEAVAYGAAVQAAILNGEGGEKVQDLVLLDVTPLSLGFEVFGSV
MAVLIPRNTTIPTRKEKVCSTRVDNQTSLMIKVFEGERTKTSDNNLLGQFKLEGIPPQPR
QVPQVTVCFDMDADGILNVFAEDKKSGNKNMLTISNNKGRLSTAEISRLVLEAEKYKSED
EEHRNKVKSRNSFEDYAYGMMNTIDSIGCKLALKDKKKIRDAVNSALQWLGNNELAHTDV
TNDKMKELQNVCNPIISKMHKQGWWWRWR
NT seq 1890 nt NT seq  +upstreamnt  +downstreamnt
atggttggaagaatcgaaggagtaggaggaggaacgacggcgataggaatagatttggga
acaacatattcatgtgttgcagtatggcagaatggccgagttgagattattgctaatgat
caagggaataggactactccttcttatgttgcttttactgatgatcaacgtttgattggt
gatgctgctaagaatcaagttgctttgaatcctatcaacaccgtctttgatgcaaagcgt
ttaattggtaggaaaatctgtgatagcttcgttcagaatgatatcaagctttggcccttc
aaagtaattgctggagcggacgagagaccaatgattcaaatcaattacaagggcaaggat
atgcagttttcagctgaggaaatctcatccatggttctcattaagatgcgagaaacggct
gaaaattatcttggttcaactgttaagaacgctgttattaccgtccctgcttactttaat
gattctcaacgtcaagctactagagattctggtataattgctggccttaatgtactgcga
atcataagtgaaccaactgcagcagcaattgcttatggccttgataagaaaacaaccagt
ggtcgtgtgaagaatgttcttatctttgatctcggtggtggtacttttgatgtttcgata
ctcaccatcagcgggagtgtttttaatgtcaaagctacatctggggatacccatctggga
ggggaggatatcgataacagaatggtaaatcactttgttcaagagttcaagaagaagtac
cacaaggacattagtggaaaccctaaggctctcaggaggctgagaacatcatgtgagagg
gcaaagaggaccctctcatctactactcggacaaccattgaggttgattctttgcatgaa
ggaattgattttcaagcgtccattactcgtgctagatttgaagagttgaacctagatttg
ttcagaaagtgcatggaaccagttcagaagtgtttggaggatgctaagatggacaagacc
gccgtccatgaagttgtcctcgttggtgggtctaccagaattccaaaagtccagtcactt
ttgcaggatttctttaatggaaaggaactgtccaagaacatcaaccctgatgaagctgtg
gcttatggtgctgcagtgcaagctgctatcttgaacggtgagggtggtgagaaagtacag
gacttggtgttgttggatgtcacccctctttctcttggttttgaggtttttggaagtgtt
atggcagtcttgatcccaaggaatacgaccattcctacaagaaaggaaaaggtctgcagt
acccgtgtggacaatcaaactagtttgatgattaaggtgttcgagggtgagagaactaaa
accagtgacaataacttgttggggcagttcaagctggaaggaattcctccacaacctcgt
caagttcctcaggtgacagtttgctttgatatggatgctgatggtatattaaatgtgttt
gccgaggataaaaaatcagggaacaaaaatatgctcacaatatcaaataacaagggaagg
ttgtcgaccgcagagatttcaaggttggttctagaggctgagaaatacaagtcagaagat
gaagaacacagaaataaggtaaagtcaagaaactcctttgaggattacgcatatggcatg
atgaatacgattgatagcattggatgcaagctggcattgaaagacaagaagaagatcagg
gatgcagttaacagtgcccttcagtggttgggtaacaacgaactagctcacacagatgtg
acaaatgacaagatgaaagagttgcagaatgtatgcaatcctattatatctaagatgcac
aagcaggggtggtggtggaggtggaggtga

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