KEGG T05758: 113348497

Papaver somniferum (opium poppy): 113348497

Entry

113348497         CDS       T05758

Name

(RefSeq) DNA topoisomerase 1 beta-like

K03163

DNA topoisomerase I [EC:5.6.2.1]

Organism

psom Papaver somniferum (opium poppy)

Brite

KEGG Orthology (KO) [BR:psom00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psom03032]
    113348497
Enzymes [BR:psom01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     113348497
DNA replication proteins [BR:psom03032]
Eukaryotic type
  DNA Topoisomerases
   113348497

SSDB

Motif

Pfam:

Topoisom_I Topoisom_I_N Topo_C_assoc RodZ_C DUF896

Other DBs

NCBI-GeneID:

113348497

NCBI-ProteinID:

XP_026448078

Position

2:97015887..97022365

AA seq 989 aa
MAVDTCMTPKIQEEDDDDDEPIVFRRTKVTPKQNQVNSEMKKVSSQRHEGSSQRHEGSSQ
KNDGSSQRRDGSSQRQDASSQRRDGSSQRQDGSSQTRDGSSQRQDGSSQRRNDSSQKHRG
PSERPSPGTASPNGQNSTLQKGKMVSSSKSAPLKSPLANPKASTSVPEKPKQPPTQNSRI
NNNEKKPLNKPPAKPNVDSEDSDDDKPLSARLLVSTSALQKSNSHNVAKVRSPHLPSSSK
RSVEDSEDEGPLSATIKMKSGGEPSVKNGSSKRSVEDSEDEGPLSATIKMKSGGEPSVKK
EIEEKPLASKAKQNGSIKKESEKLNSPKLLNKRPLGDSSTPTHSSAKKPKLSESSVAAKA
KQVSVKAEVKTEDDDDDDDDVPIAERLKKAAVSAGTSQPKKKTITKVVTSSLKTSKKSKK
IVKKSKYSKSIKLQPSSGDGQKWTTLEHNGVIFPPDYKPHGVKMLYNGQPVDLTPEQEEV
ATMFAVMKDTEFAMKEKFVENFMNDWRGILGRNHIIKKFELCDFTPIYDWHQAEKEKRKQ
MTTEEKRVAKEEKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR
PSDITINIGKGVPIPECPIPGQRWKEVKHDNTVTWLAFWIDPINSKEFKYVFLAASSSLK
GQSDKEKYEKARLLKDYIHDIRANYTKDFTNKDLGKRQIAVATYLIDKLALRAGNEKDDD
EADTVGCCTLKVENVKLVPPNKLEFDFLGKDSIRYLNTVDVELPVYKAIGQFKNGKNDGE
DLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDQLHKNTKDGDVGVKVVVYNLAN
KEVAIICNHQRTESKSHTAQVGKLQGNIQKLKIEIDVLEKDLERTKKGKPLLPRLDDKGE
EFVPRNLAPDAIQRKINKIYERIEKMERDISTKEELKTIALGTSKINYLDPRISVAWCKR
HEVPIEKIFNKSLLAKFAWAMDVDPSFRF

NT seq 2970 nt +upstreamnt +downstreamnt
atggctgttgacacttgcatgacacctaaaatacaagaagaggatgacgatgatgatgag
ccaattgtattcagaagaaccaaggtaacaccaaagcagaatcaagtaaactccgaaatg
aagaaggtatcatcacaaaggcatgagggatcctcccaaagacacgagggatcttcccag
aagaacgatggatcttctcaaagacgggatggttcttctcagagacaggacgcatcttct
caaagacgcgatggatcttctcaaagacaggatggatcttctcaaacacgtgatggatct
tcgcagagacaggacggttcttctcaaagacgtaatgattcatctcaaaaacaccgtggg
ccatcagaaaggcctagtcctggaacagcttctcctaatggtcaaaactcaactttgcaa
aagggaaagatggtttcatcttcaaaatcagcaccactcaagtcacctttagctaatcca
aaggcatcaacttccgtaccagagaagccgaaacaaccgcctacgcaaaattcacgaata
aataataatgaaaagaagcctttgaataaacctcctgctaaaccaaatgtcgattctgag
gattctgacgatgataagcccttgagtgccagacttctggtatccacctcagcattgcag
aaaagcaactctcacaatgttgctaaggttcgtagtccacaccttcccagttccagtaaa
agatctgtagaagattctgaagatgagggtcctttgtctgcaacgatcaagatgaagtca
gggggagagccgtctgttaagaacggttccagtaaaagatctgtagaagattctgaagat
gagggtcctttgtctgcaacgattaagatgaagtcagggggagagccgtctgttaagaag
gaaatcgaagagaaacctttagcttccaaagcgaagcaaaatggctctatcaagaaggaa
agtgaaaagttaaactccccaaaattgttaaacaagaggccgctaggtgatagcagtact
ccaactcactcttctgctaaaaagccaaaactatcagagtcatctgttgcagctaaagca
aaacaagtgtctgtgaaagctgaagtcaagacggaggatgacgatgatgacgatgatgat
gttccaattgccgagagactgaagaaggcagctgtgtcggcaggtacatctcaaccaaag
aagaaaacaataacgaaggttgttacctcttcacttaaaacgtcaaagaaatcaaagaaa
atagtaaagaaatcaaaatactcgaagtctataaagctacagcccagttccggcgatgga
caaaagtggactaccttagagcacaatggtgttattttccctccagactacaagcctcat
ggtgtcaagatgctgtacaatggacaacctgttgatttgactcctgaacaggaggaggtt
gcaacaatgttcgcagtgatgaaagacacggagttcgctatgaaggagaaatttgtggag
aacttcatgaatgattggagagggatactcggaagaaatcatataattaaaaagtttgag
ctttgtgatttcacccctatctatgactggcatcaggctgagaaggagaagagaaaacaa
atgaccacggaagagaagagggttgccaaagaagaaaaattgaagcaagaggagaagtac
atgtgggctgttgttgatggtgtgaaagagaaggttggaaacttcagagtggaaccacct
gggttgtttcgtggccgtggagagcatcctaagatgggaaaattgaaaaaacgcattcga
ccgagtgacattacaataaatattgggaaaggggtgccaattccggagtgtccaattcct
ggtcaaaggtggaaagaagttaaacatgataataccgttacatggttagcattttggatt
gatccaatcaattcaaaagagttcaagtatgttttcttggctgctagtagttcactgaaa
gggcaaagcgacaaggagaagtatgagaaagctagattattaaaggactacattcatgat
attagagcaaattacacaaaggacttcacaaataaagatcttgggaaacggcaaatagca
gtcgcgacgtaccttatcgataagttggctctcagggcaggaaatgagaaggatgatgac
gaggctgatacagttggttgctgtacgctgaaagtggaaaatgttaaattagtccctcca
aacaaattagagtttgatttccttggtaaagattccattagatatctaaatactgttgat
gtcgagcttccagtgtacaaagcaatcggacagtttaaaaatggaaaaaatgatggcgaa
gatcttttcgacaagcttgatactagtaaactgaatgctcatcttaaggaactcatgcct
ggactcactgcaaaagtctttcgtacctacaatgcatcgattactttagatgaccagttg
cataaaaataccaaggatggtgatgttggagtgaaagttgtcgtttataaccttgcaaac
aaggaggttgcaattatatgtaaccatcaacgtactgaatcaaagtcccacactgcacaa
gtgggaaaattgcaaggcaatatacagaagttgaagattgagatagatgtcctggagaag
gatttggagagaaccaaaaaaggaaagcctctacttccgaggttggatgataaaggagag
gaatttgtgccgaggaacttggcccctgacgcaatacagaggaagatcaataagatatat
gagaggattgagaaaatggaacgtgatattagtacaaaagaggagcttaaaaccattgcg
ttgggcacatctaagattaattatcttgatcctagaatttcagttgcttggtgcaagcga
catgaagttcctattgaaaagatattcaacaagtcacttctggcgaagtttgcttgggca
atggatgtggatcctagtttcagattttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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