KEGG   Papaver somniferum (opium poppy): 113355354
Entry
113355354         CDS       T05758                                 
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/6/8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
psom04141  Protein processing in endoplasmic reticulum
psom04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113355354
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113355354
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113355354
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:psom01009]
    113355354
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113355354
   03009 Ribosome biogenesis [BR:psom03009]
    113355354
   03110 Chaperones and folding catalysts [BR:psom03110]
    113355354
   04131 Membrane trafficking [BR:psom04131]
    113355354
   03051 Proteasome [BR:psom03051]
    113355354
   03029 Mitochondrial biogenesis [BR:psom03029]
    113355354
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113355354
Protein phosphatases and associated proteins [BR:psom01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     113355354
Spliceosome [BR:psom03041]
 Complex B
  Other components
   Prp19 complex
    113355354
 Complex C
   Prp19-CDC5 complex
    113355354
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    113355354
Chaperones and folding catalysts [BR:psom03110]
 Heat shock proteins
  HSP70 / DNAK
   113355354
Membrane trafficking [BR:psom04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    113355354
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    113355354
Proteasome [BR:psom03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    113355354
Mitochondrial biogenesis [BR:psom03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    113355354
Exosome [BR:psom04147]
 Exosomal proteins
  Proteins found in most exosomes
   113355354
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A
Other DBs
NCBI-GeneID: 113355354
NCBI-ProteinID: XP_026453974
Position
3:complement(14540756..14543524)
AA seq 652 aa
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRVSDPSVQADMKLWPFKVIAGPGEKPMIVVTYKGEEKQFSA
EEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY
TSITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDIVLVGGSTRIPKVQQLLQEFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGVMTTLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEQHKQ
KVESKNALENYAYNMRNTIKDEKIAGKLEPSDKKKIEDAIDGAIQWLDTNQLAEAEEFDD
KMKELESICNPIIAKMYQGGVGPDMGGAGGMDEDGPSMGAGSGAGPKIEEVD
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggcaggaaaaggggaaggaccagccattggtattgatctgggaacaacatattcctgt
gtaggtgtatggcaacatgatagggttgagattatcgctaatgatcaaggaaacagaaca
acaccttcttatgttgcctttactgatactgaacgtttgattggtgatgctgctaagaat
caagttgctatgaaccctgttaacaccgtctttgatgcaaagcgtttgattggaagaagg
gtgtctgatccatcagttcaagctgacatgaagctatggcctttcaaggttattgctgga
ccaggagaaaaacccatgattgttgtgacttacaaaggcgaagagaaacaattttcagct
gaagaaatatcatctatggttcttattaagatgcgcgagattgcagaagcctaccttggt
tcttctataaagaatgctgttgtgactgtccctgcgtacttcaatgattcacaacgtcaa
gccacaaaggatgctggttcaattgctggtctaaatgtcttgagaatcatcaatgagcca
actgctgctgcaattgcatatggtcttgataagaaggcgtcgagtgttggggaaaagaat
gttcttatttttgatcttggtggtggtacatttgatgtttcattgctgactattgaagag
ggtattttcgaagtgaaggctactgctggagatacccatcttggaggagaagacttcgat
aacaggatggtgaatcattttgtgcaagagtttaagaggaagaacaagaaggatatcagt
ggaaatcccagggcattaagaaggttgaggacagcatgtgagagggccaagaggactctt
tcctccactgcccagaccacaattgaaattgattcgttgtatgaaggtgttgatttttac
acgtctattactcgtgcgagatttgaagagatgaacatggatttgtttaggaaatgtatg
gagcctgttgagaagtgtttgagggatgcgaagatggacaagagcagtgttcatgatatt
gttctagtgggtggttcaactaggattccgaaagtgcagcagttgttgcaggagttcttt
aatgggaaagaactttgcaagagtatcaaccctgatgaagctgtggcttatggagcggct
gtgcaggcagcgatcttgagtggtgaaggtaatcagaaagtgcaggacttgttgctgttg
gatgtcactcctctctcccttggactcgagacagctggaggggttatgactacattgatt
ccaagaaacaccaccatccccaccaagaaggagcaagttttctctacctattccgacaac
caacctggagtgttaattcaggtttatgaaggagaaagagcaagaacaaaggataacaat
ttgcttgggaaattcgagttgtctggaatcccacctgcgcctcgtggtgtccctcagatc
actgtttgctttgacattgatgcaaatggtattctgaatgtctctgctgaggataaaacc
acagggaaaaagaacaagatcacaatcactaatgacaagggaagactgtccaaggaggag
attgagaagatggtgcaggaggccgagaggtacaaggcagaggatgagcagcacaagcag
aaagtcgagtcgaagaatgctttggagaactatgcttacaatatgaggaataccatcaag
gacgagaagattgctgggaagttggaaccatctgacaagaagaaaattgaggatgcaatt
gatggggccatccagtggctcgacaccaaccagcttgcagaggccgaggagtttgatgac
aagatgaaagagctggagagtatttgcaacccaattatcgccaagatgtatcaaggtggt
gttggacctgacatgggtggagctggtggcatggatgaagatggtccttcaatgggtgct
ggtagcggtgcaggacccaagattgaggaagtcgattaa

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Ontology (9)   
   KEGG BRITE (9)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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