KEGG   Papaver somniferum (opium poppy): 113357126
Entry
113357126         CDS       T05758                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom04145  Phagosome
psom04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:psom00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113357126
  09142 Cell motility
   04814 Motor proteins
    113357126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psom03036]
    113357126
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psom04812]
    113357126
   04147 Exosome [BR:psom04147]
    113357126
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     113357126
Cytoskeleton proteins [BR:psom04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    113357126
Exosome [BR:psom04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113357126
  Exosomal proteins of colorectal cancer cells
   113357126
  Exosomal proteins of bladder cancer cells
   113357126
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF6684
Other DBs
NCBI-GeneID: 113357126
NCBI-ProteinID: XP_026456201
Position
3:116977488..116980015
AA seq 449 aa
MREILHIQGGQCGNQIGAKFWEVICDEHGIDPTGRYKGDTSDLQLERINVYYNEASGGRY
VPRAVLMDLEPGTMDSIRSGQYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV
VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC
LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDTKNM
MCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPT
GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQDATAEEDEEGEYEDDVEGEYEN
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgagaaatccttcacatccaaggaggtcaatgtggtaaccaaatcggagcaaagttt
tgggaagtaatatgtgatgaacatggtatagatccaacaggaagatacaaaggagataca
tcagatcttcaattggaaaggattaatgtatattacaatgaagcatcaggtggaagatat
gtacctagagccgtacttatggatcttgaaccaggtactatggatagtatcagatctggt
caatatggtcaaatctttcgtcctgataactttgtttttggtcaatctggtgctggtaac
aactgggctaaaggtcattacactgaaggagctgagttgattgattctgttcttgacgtt
gttagaaaagaagccgaaaattgtgattgtcttcaaggttttcaggtatgccactctcta
ggaggtggtactggttctggtatgggaaccctcttgatctccaaaattagagaggaatat
ccagataggatgatgcttacattctcagtcttcccatcaccaaaggtctcagacactgtt
gtggaaccctacaatgccactctctctgttcatcagttggtggagaatgcagatgaatgc
atggtgctcgacaatgaagctctctatgacatttgcttcagaaccctaaagctcagcacc
ccaagctttggtgatttgaatcacttgatttctgcaaccatgagtggtgtgacttgctgt
ctgaggttccctgggcagctgaactcagatttgcgtaagctggcagtgaatctcattccc
ttccctcgtcttcacttcttcatggtgggatttgccccactcacatcccgtggttcccag
caatacatctctctcaccgttcccgagttgactcagcagatgtgggacaccaagaacatg
atgtgtgcagcagacccacgacacggcagatacctcactgcctcagccatgttcagagga
aagatgagcaccaaggaggttgacgagcagatgatcaatgtccagaacaagaactcctcg
tactttgttgaatggatccccaataatgtgaaatctagtgtctgtgatatccctcctact
gggttaaagatggcgtctacatttattggaaactcaacatccattcaggagatgtttagg
agagtaagtgagcagttcacagccatgtttaggcgtaaggctttcttgcattggtacact
ggtgaaggaatggacgagatggagttcactgaagcagagagcaacatgaacgatttggta
tctgagtaccagcagtaccaggatgccactgccgaggaagatgaggaaggtgaatatgaa
gatgatgttgaaggagaatatgagaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system