KEGG   Papaver somniferum (opium poppy): 113358467
Entry
113358467         CDS       T05758                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113358467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113358467
Spliceosome [BR:psom03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113358467
 Complex B
    113358467
 Complex C
   U2 SnRNP specific factors
    113358467
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 113358467
NCBI-ProteinID: XP_026457842
Position
3:204695926..204701790
AA seq 512 aa
MSSTLLEVTRSKHEEIERFERLIVKDLQNEPASNRERLFQNHRVRNMIEAITSSTEKLIE
IYEDNDNARKDEIAALGGQTATGTNVFSAFYERLKEIRDYHRRHPNSRALDVYEEAEELL
KEEPHVEFSGEEGHGRYLDLHELYNEYINSKFAERNEKTKEPIEYSAYLDVFSQPHTISC
KLKLSRQYRDYLEHLLEYLIYFFQRKEPLQDLDRVFSKVETEFEDLWEDGKIQGWESKGG
NISSQDSIIDLDYYSTLHELMDVGNDKLKEALAALGLKSGGTLQQRAERLFLTKHTPLEQ
LDKKHFVKGLRSIAQNGATVASQEMELKEIALKESKMKRLCEMLNETIEQTKENVQKKQA
LTVDEREKELEEEEEQVDTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCE
ICGTHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKALWERIQARQGVN
KWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtcttcgacactattggaagtgactaggtccaaacatgaggaaatagaacgctttgaa
cgtctgattgttaaagatcttcagaatgaaccagcttcaaaccgtgaacgcctctttcag
aatcatagagttcgtaacatgattgaagcaattacttcctccactgaaaagcttattgag
atttatgaagacaacgataacgcgaggaaggatgaaattgctgcattgggtggccaaact
gccacaggaaccaatgtgttcagtgccttttatgaaaggttgaaagagattcgtgactat
cacaggcgccatccaaattctcgtgctttggatgtgtacgaggaggctgaggagttactg
aaagaagaaccacatgtggagttcagtggcgaggaaggtcatggacggtacttggacttg
catgagctgtacaatgagtacattaattcaaagttcgcagagcgaaacgagaaaacaaaa
gaaccaatagagtattctgcttatctggatgtgttctcccaaccacatacaatttcatgt
aaactaaagctaagcagacaatatagagattacctggagcatttgctggagtatctgatt
tatttctttcagcgaaaagaaccattgcaagaccttgatagagtgttttcaaaggtagaa
actgaatttgaagatctttgggaggatggcaagatacaaggatgggagagtaaaggtggc
aacatttcatctcaggattctataatcgatctcgactactacagtacattgcatgagtta
atggacgtgggtaacgacaaattaaaagaggcactggctgctttgggattaaaatcaggt
ggcactcttcaacagcgtgcagagaggcttttcctgacgaagcacacgcctcttgaacag
ttggacaaaaaacactttgtgaaaggtttacgtagtatagcacaaaatggtgccactgta
gcatcacaagagatggagctgaaggaaattgccttgaaagagtccaagatgaaacgattg
tgtgaaatgctaaatgagactatagaacaaactaaagaaaatgtccagaagaaacaggcg
ttgacagttgatgagagggaaaaagaacttgaagaggaggaagaacaggtggacactgaa
agtgacgatgatgagcagcagatttataatcctctcaagttgccaatgggttgggatggg
aagcctattccctactggttatataagcttcacggtcttggccaggaatttaagtgtgag
atctgtgggactcatagttattggggtcgcagagcctttgaacggcacttcaaagagtgg
cgtcatcagcatggtatgcgatgtcttggcatccccaacaccaaaaacttcaatgaaatt
acatcgattcaggaagctaaggcactgtgggaaagaatacaagcacgccaaggggtgaac
aagtggcggccagaccttgaagaagagtacgaagataaggagggtaacatctataacaaa
aagacttacacggatctacaacgccagggcctgatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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