KEGG   Paraclostridium sordellii: RSJ16_00925
Entry
RSJ16_00925       CDS       T05252                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
psor  Paraclostridium sordellii
Pathway
psor03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RSJ16_00925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psor03021]
    RSJ16_00925
   03400 DNA repair and recombination proteins [BR:psor03400]
    RSJ16_00925
Enzymes [BR:psor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RSJ16_00925
Transcription machinery [BR:psor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RSJ16_00925
DNA repair and recombination proteins [BR:psor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RSJ16_00925
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF2325 Rrn6_HB
Other DBs
NCBI-ProteinID: AUN12882
UniProt: A0A9P1KX87
Position
95657..96604
AA seq 315 aa
MIEIEKPRVDIIEISEDHRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNSIRIDG
VLHEFSTVPGVKEDVTEIILALKELSATIDGEGNRTLKIEAQGPCTVTGADIICPPDVEI
ISKDLHIATLDDNSKFNMEISVNKGRGYISSEDNKTEHMPIGVLPVDSIYTPVEKVSYHV
ENTRVGQKSDYDKLILEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSNVEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEEDMMKVRNLGKKSLEEVI
QKLEELGLGLKPSEE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatagaaatagaaaaaccaagagtagatataattgaaattagcgaagaccatagatat
ggtaaattcgttatagagcctctagaaagaggatatggaataactataggtaatgcatta
agaagaatattattatcttctttaccaggagtagctgttaactctataagaatagatgga
gttcttcatgagttctcaacagttcctggtgttaaagaagatgttactgaaataatatta
gcattaaaagaattatcagctactatagatggtgaaggaaatagaacacttaaaatagaa
gcacaaggaccatgtacagtaacaggtgctgacataatatgtcctccagatgttgaaata
ataagcaaagacttacatatagctacgctagatgataattctaagtttaacatggaaata
tctgtgaataaaggaagaggttatatctcttctgaagacaataaaacagagcatatgcct
ataggagttcttcctgtagattcaatatatactcctgttgaaaaagttagctaccatgtt
gaaaatactagagttggtcaaaaatcagattatgataaattaatacttgaagtttggact
aatggaagtataaatcctcaagaaggaatatcacttgcagctaaggttctagttgaacat
cttaatctattcatagatttaacagagcatgtaagcaatgttgaaataatggtagaaaaa
gaagaagatcaaaaagaaaaagttcttgagatgactatcgaagaattagacttatcagtt
agatcttacaactgtttaaagagagcgggaataaatacagttgaagaattagctaataaa
tctgaagaagatatgatgaaagttagaaacttaggtaaaaagtcattagaagaagtaatc
cagaagttagaagaacttggattaggtcttaaaccaagcgaagagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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