KEGG   Pseudomonas sp. Os17: POS17_3320
Entry
POS17_3320        CDS       T04177                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
psos  Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:psos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psos03400]
    POS17_3320
DNA repair and recombination proteins [BR:psos03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     POS17_3320
    Archaeal homologous recombinant proteins
     POS17_3320
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_21 AAA_29 SMC_N ABC_tran nSTAND3 MMR_HSR1 cobW AAA_22 AAA_25 RsgA_GTPase AAA_28
Other DBs
NCBI-ProteinID: BAQ75014
UniProt: A0A0D6BJT8
Position
3770311..3773955
AA seq 1214 aa
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEILTSDPRTLLRRGSGSGYAEVDFVGIDGRRYRARWEANRARDKA
NGKLQASRQNLTDLDSEQLLSNQSKSEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTSIYSQLGRRAYSKSKEAEEVHKELKAQASGITPLDPEARAELDQQ
FDAARQQLKEQQARLKQLEAQHSWLKELGQWQQARQDAAEQLQQAEQQALALAPERLRLQ
RLEQLAPQRHQFLRQIELHQALEPLGQQIEQQAAQQVELQQRHQQLQQHVLDADSALTQA
QSQHSDSAPLLREAFAEQANLSRLGQSLSEAGETRDRAQSVSAQGQQSIAQLLEKQRLVG
ERLERIAGQLAHSAALAPLSEAWTLYRERLQQLMLIGNRLNQGQAELPALEQRAGTAAQQ
LAEQRSHLELLYSEAGAEPQAVAEQIQLLDGLLKDNRKQQRATEELARLWAQQQELDQRG
RALQDKQQAVAAQREALNQAGLQAKAELSVAEQTLSVTQALLERQRLARSASVEELRGQL
QDDQPCPVCGSVEHPYHQPEALLQSLGRHDESEEANARQAVDRLKEQLNELRAQVQGLIA
QQKEFLQQQEQLASQQQALAPSLQAHPQSASLLDQDPARRDAWLRQQLEQLQQSITQDES
RLDALLTLQKDATRLQQQLQQAQDASQQAAQHLHKQQEQLAADQQRLEEELGSFNNLLPA
EVLEGLRRDPASTFMQLDQQVLQRIEQLRERQDEAEEQQQRQLLLDKEQDRQLTRQQQLS
DAQQQLDALSQQHQACQDRLAALLGSHPSAELWQQQLDQAVEQARSAQAKAQHEQQELQQ
QLIQLSAELKARQERLQALDSERQQLAGSIEQWRAQHPELDDSGLQQLLELDEEQVQQLR
QHLQANDKAIEQAKVLLQERQQRLQQHQAQHNGNLEAGQLAQALEGLQQQALASEQQVAE
LRARQSEDQRRQEANQALGQQIHDAYQQWQRWARLNALIGSATGDTFRKIAQAYNLDLLV
HHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQ
VSRQGNGLSTLEVK
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgaagatcctggccatccgcctgaagaacctggcctccctggccgggccgttcgagatc
gacttcaccgccgagcccctggccagcgccgggctgtttgccattaccgggccgaccggc
gccggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaacatcggccgcgagaccaaggtccccgaggtcgacagcgagatcctcaccagc
gacccgcgcaccctgctgcgccggggcagcggcagcggctatgccgaggtggactttgtc
ggcattgacgggcgccgctaccgcgcccgctgggaggccaaccgcgcccgcgacaaggcc
aacggcaagctgcaggccagccggcagaacctcaccgacctggacagcgaacaactgctg
agcaaccagagcaagagcgaatacaagcagttgatcgaggcccgcctggggctcaacttc
gagcaattcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggcc
gatgacaaggaacgcagcgagctgctggaaaagctcaccaacacctcgatctacagccag
ttggggcggcgcgcctacagcaagagcaaggaggccgaagaggtccacaaggaactcaag
gcccaggccagcggcatcaccccgctggaccccgaagcccgggccgagctggatcaacag
ttcgacgccgcccggcagcagctcaaggagcagcaggcccggctcaagcaactggaggcc
cagcacagctggctcaaggagctgggacagtggcagcaggcccgacaggacgccgccgag
cagttgcaacaggccgagcagcaggccctggctctggccccagagcgcctgcgcctgcag
cgtctggaacaactggcgccgcagcgccaccagttcctgcgccagatcgagctgcaccaa
gcactggagcccctgggccaacagatcgagcagcaggccgcgcaacaggttgagctgcaa
caacgtcaccaacagctgcaacagcacgtgctcgacgccgacagcgccctgacccaggcc
cagagccagcacagcgacagcgcgccgctgctgcgcgaagcctttgccgaacaggccaat
ctgagccgtcttggccagagcctgagcgaggccggcgaaacccgtgaccgcgcgcaaagc
gtcagtgcccaaggccagcaaagcattgcccaactgctggagaagcagcgtctggtgggt
gagcgcctggagcggattgccgggcagttggcgcacagcgccgccctcgcccccttgagc
gaagcctggacgctctaccgcgaacgcctgcagcaactgatgctgatcggcaaccgcctg
aatcagggccaggccgaattgccagccctggaacagcgggccggcaccgcggctcagcaa
ctggccgaacaacgttcccaccttgaattgctctacagcgaagccggtgccgaaccccag
gccgtggccgagcagatccaattgctggacggcctgctcaaggacaaccgcaagcaacaa
cgggccacggaagagctggcacggctctgggcccagcaacaggaactggaccagcgcggc
cgggccctgcaagacaagcagcaagccgtggccgcccagcgcgaggcgctgaaccaggcc
ggcctgcaagccaaggccgaactgagcgtcgccgagcagaccctgagcgtcacccaggcc
ttgctggagcgccagcgcctggcccgcagtgccagtgtcgaggagctacgcgggcagttg
caggacgaccagccctgcccggtgtgcggcagcgtcgagcacccctatcaccagcccgaa
gccctgctgcaaagcctggggcgccatgacgaaagcgaagaagccaacgcccgccaggcg
gtggacaggctcaaggaacagctcaacgaattgcgggcccaggtccagggcctgatcgcc
cagcagaaggaattcctccagcaacaggaacaactggccagccagcaacaggcgctggcc
cccagcctgcaagcccacccgcagagtgccagcctgctggaccaggacccggcgcgacgc
gatgcctggctacgccagcaactggaacagttgcaacagagcatcacccaggatgaaagc
cgcctggatgccttgctgaccctgcaaaaggacgccacgcggctccagcagcagttgcag
caagcacaagacgccagccagcaggcggcccagcatctgcacaagcagcaggagcaattg
gccgccgaccaacagcgtctcgaagaagaactgggcagcttcaacaacctgctgccggcc
gaggtgctcgaaggcctgcgccgtgatccggccagcaccttcatgcaactggaccagcag
gtgctgcaacgcatcgaacaactgcgcgagcgccaggatgaagccgaagaacagcagcag
cgccaactgctgctggacaaggaacaggaccgccaactgacccgccagcagcaactgagc
gacgctcagcagcagctcgacgccctgagccaacagcaccaggcctgccaggaccggctg
gccgccctgctggggtcgcaccctagcgccgagctctggcagcaacagctcgatcaagcc
gtggaacaggcccgcagcgcccaggccaaggcccagcacgagcagcaggagctgcagcag
caactgatccaactgagcgccgagctcaaggcccggcaagagcgtctgcaagccctggac
agcgaacgacagcaactggccggcagcatcgaacaatggcgtgcccagcatccggagctg
gacgacagcggcctgcaacagctgctggaactggacgaggaacaggtccagcaactgcgc
cagcacctgcaggccaacgacaaggccatcgaacaagccaaggtcctgctccaggagcgt
cagcaacgcctgcaacagcaccaggcccagcacaacggcaacctggaggccgggcaactg
gcccaggcccttgaagggctgcagcaacaagccctcgccagcgaacagcaggtggcggaa
ctgcgcgcccggcaaagcgaggaccagcgccgccaggaggccaatcaggccctgggccag
cagatccacgacgcctaccagcaatggcagcgctgggcccgcctgaatgccctgatcggc
tcggccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtg
caccacgccaacgcccaactgcgccagctggtgcggcgctaccgcctcaagcgcggcggc
agcatgctcggcctgctggtgctggacaccgaaatgggcgatgaactgcgctcggtgcac
tcgctgtccggcggcgaaaccttcctggtgtccctggccctggccctggggctggcgtcc
atggcctccagcaccctgaagatcgaatcgctgttcatcgacgaaggtttcggcagcctc
gaccccgagtccctgcaactggccatggacgccctcgacggcctgcaggcccaggggcgc
aaggtcgcggtgatttcccacgtgcaggaaatgcacgaacggatcccggtgcagatccag
gtcagccgccagggcaacggcctgagcaccctggaggtgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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