KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4567
Entry
PSPPH_4567        CDS       T00266                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PSPPH_4567 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psp03021]
    PSPPH_4567 (rpoA)
   03400 DNA repair and recombination proteins [BR:psp03400]
    PSPPH_4567 (rpoA)
Enzymes [BR:psp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PSPPH_4567 (rpoA)
Transcription machinery [BR:psp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PSPPH_4567 (rpoA)
DNA repair and recombination proteins [BR:psp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PSPPH_4567 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AAZ36939
UniProt: Q48D61
Position
complement(5214170..5215171)
AA seq 333 aa
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGVLNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgcagatttcggtaaatgagttcctgacaccccgccatattgatgtgcaggttgtcagt
ccaacccgcgccaagatcactctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgcttcgccgcattttgttgtcctccatgcccggctgtgcagtagtcgaggccgag
attgacggtgtactccatgagtacagcgccatcgaaggtgtacaggaagacgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgagacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaaccccgatcacgtaatcgctaacctggcgtctaacggcgtcttgaac
atgaagctcaccgtagctcgtggtcgtggttatgagccggcagactcgcgtcaaagcgat
gaagacgaaagccgcagcattggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgagcagcgtactaacctggacaagctg
gttattgatctggaaaccaacggtactctggaccctgaagaggctatccgtcgcgctgca
accatcctgcaacagcagctggctgcgttcgtggacctcaaaggcgacagcgaaccagtg
gtaatcgaacaggaagacgagatcgatccgatcctgcttcgtccggttgacgatttggaa
ctgaccgtgcgttcggccaactgccttaaggcggagaacatctactacatcggcgatctg
attcagcgcaccgaagtagagctgttgaagactccgaacctgggcaagaaatccttgacc
gagatcaaggacgttctggcttctcgtggtctctccctcggcatgcgcctcgacaactgg
ccgccggcaagtcttaagaaggacgacaaggctacggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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