KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_5008
Entry
PSPPH_5008        CDS       T00266                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp00300  Lysine biosynthesis
psp00470  D-Amino acid metabolism
psp01100  Metabolic pathways
psp01110  Biosynthesis of secondary metabolites
psp01120  Microbial metabolism in diverse environments
psp01230  Biosynthesis of amino acids
Module
psp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSPPH_5008 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSPPH_5008 (lysA)
Enzymes [BR:psp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PSPPH_5008 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AAZ37873
UniProt: Q48C01
Position
complement(5675841..5677088)
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDGEPRAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagcattgtctgcc
attgccgagcgcttcggcacgccgacctatgtctactcgcgcgctcatatagaggcgcaa
taccgtgcctacgccgatgcgctgagcggcatgccgcatatggtctgcttcgccgtaaaa
gccaactccaatctgggcgtgttaaatgtcctggcgcgtcttggcgccggtttcgacatt
gtttcgcgcggcgaactggagcgtgtgctggccgcaggcggcaaagccgagaagatcgtg
ttttccggcgtcggcaagacccgtgaagacatgcgtcgcgctcttgaagttggtgtgcac
tgcttcaatgtcgaatccaccgacgagcttgagcgcctgcaggaagtggctgccgagctc
gacgttcgtgcgccgatatcgctgcgggtcaacccggatgtggatgcaggcactcaccct
tacatctccaccggccttaaagaaaacaaattcggcatcgccattgcagatgccgaagac
gtttacattcgcgcctcgcaactgccaaacctggaggtgatcggggtcgactgccatatt
ggctcgcaactgaccacgctcgagccgttcattgatgcgctggatcgcctgctggacctg
gttgatcgcctgggcgattgcggcattcacctgcaccatatcgatctgggtggcggtctt
ggtgtgcgttatcgcgacgaagagcctccgctggcggccgactacatcaaagccgtgcgt
gagcgactggctggtcgtgatctggggctgttgttcgagccggggcgcttcatcgtggcc
aacgcaggcgcgctgctgacccgcgtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgatctgatccgcccagcgctttatcaggcgtggatg
gacgtcaccgcggtacgcccgcgcgacggcgaacctcgtgcgtacgacatcgtcgggccg
atctgcgagaccggcgacttcctcgccaaagggcgcgagctggcgctggccgaaggcgat
ctgttggcggtccattcggccggtgcctatggcttcgtcatgagttcgaactacaacacc
cgtggccgtgctgctgaggtactggtcgacggttcccaggcttttgaagtgcgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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