KEGG   Psychrobacter sp. P2G3: AK823_01695
Entry
AK823_01695       CDS       T04386                                 
Name
(GenBank) ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
pspg  Psychrobacter sp. P2G3
Pathway
pspg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pspg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AK823_01695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspg03019]
    AK823_01695
   03009 Ribosome biogenesis [BR:pspg03009]
    AK823_01695
Enzymes [BR:pspg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     AK823_01695
Messenger RNA biogenesis [BR:pspg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AK823_01695
Ribosome biogenesis [BR:pspg03009]
 Prokaryotic type
  rRNA processing factors
   AK823_01695
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AMN48764
UniProt: A0A7U4QNF8
Position
complement(394209..398483)
AA seq 1424 aa
MKRILINATQNEEIRVALCKGNHLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GSQRQGFLPIREISAEYLSGNPRDENIKKLIKEGDELIVQVEKEERGNKGAALSTYVSLA
GRYLVLMPNNPRGGGISRQISGKLREDMKRMLSNLDLPKGMSVIIRTAGIGKTQEDLQHD
LNHLLNIWQAIQEQNQKYPSPRLVHQEAGVVTRAVRDYLRDDIAEIWIDNENAYIEAAGF
IDAVMPTQADKLRKYTDYEPMFARFNIEKQIETAYQREVRLPSGGSIVIDQTEALVSIDI
NSAKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDNKHQKEVEKRLV
DATKYDRARVQFGEISKFGLMEMSRQRLRPSLEESTGYICPRCHGNGMIRDLRSLSLSIM
RQIEQIALKERQGEVQAEVPTDIAAFLLNEKRDSLVYLEQDSGTRITILPHAHLESPNFK
LHFNRDGFAPTSYERITDTQQQEHSDLGYDVDWQTAEKERPEQQPTRQPRKTADNQGSQT
DDRSNNQNSGRSQPAASGQSNNQNSSSSTETKSAASHSNNRNQNNNNSQSNNESTQVSST
RAATNNVPLKNQTTPTPVATQSVPAAQPKAVAWLSNLFAQAPQAQTANSISSRDAAEAIE
ALVNTGAQSLGSFGQVDNTALDNNQRSSSTQDSHQQNVRPQDDNHAQAVTQQSRGSADND
SDNGDDNKDSNGDDRRKRKARKSRSSKPRQRKEQRDDNDSVDNSTDSTNDSTQSDTQNKR
EHDNKRGNDRNRNRQDNRQDSRQDNRQHNRNDSESQDDTATEEQSRTKRKPHSQRNSRGK
LERGETLTADNNAKQSNQQSATNGKSQASARRNQDPNEVILQVNEAPTKLKASEVVHLSL
DDSKSGQTAHKPTDMQEAEPNVAVDDKDLTATPRDADKSKETVTKRIESTDADTVKTEST
ERLAEEKPQSNEHKAKPTEDNKSSVEQSEKVSDAKTITTESVKESAQASETAKADTTQAL
VDAQQSDDNSEVEATSSTKSSTANNSNADTNSDVNSNSEVDNSKTKNGAVLTLTHDALFA
TRYVAAQKFGQASNDPRVVRRQQSAPVAESDAKASTVASTVPTTIRGTVGEFIHATLADA
QSRLADNGVISCFIDAIEAHTQQAKPAAVEVGDVDSVNDKTFDFSNYGYQPLDADYLTRF
DAMTQAVSQFAAAQGKTEVAPRAIGKRASNDPRGQHPDYHADEPKQATLNVPDESLAEPK
SDTQSQEIVEINAAETSEMAETVNDAPSETAETAETENEAIQADNGQIDAHETEAAALTS
EVQADDISTESEQLLKADQMLEENKAVELTDSIKEDSQAGKSKTTIASYKNMIESVAEQL
LPQTGMFNLTTPKVPKARSRKPKTDHVKPTQAEKSENDNSDSES
NT seq 4275 nt   +upstreamnt  +downstreamnt
atgaaacgcattctgattaacgccactcaaaacgaagaaattcgtgtcgccttatgtaaa
ggcaaccatctctacgatttcgatttagaaaaccgtactcgcgagcaaaaaaaatccaac
atttataaaggtcatgtgacccgtgtcgagccgtcgcttgaagcagtattcgttgaatac
ggttcacagcgtcaaggatttttacctattcgtgagatttctgccgaataccttagcggc
aatccgcgtgatgaaaatatcaaaaaacttatcaaagaaggcgatgagctaatcgtccaa
gtcgaaaaagaagagcgcggcaataaaggcgctgccctatcgacttatgtatcattggct
ggtcgctatcttgtattgatgccaaataaccctcgtggtggcggtatctcacgtcaaatc
tctggcaaactacgcgaagatatgaagcgtatgctgagcaatcttgatttacctaaaggc
atgagtgttatcattcgtactgcaggtattggtaagacccaggaagatttgcaacacgat
ctcaaccatttgcttaacatctggcaagctatccaagaacaaaaccaaaagtacccttca
ccgcgcttagttcatcaagaagcaggcgttgtcacacgtgcagtacgtgattatctacgt
gatgatatcgctgagatttggatcgataacgaaaacgcttacattgaagcggcaggattt
attgatgcggtcatgccaacacaagcagataagctccgtaaatatacggactacgagcct
atgtttgcgcgttttaatattgaaaagcagattgagacagcctatcagcgtgaagtacgt
ttgccatctggcggctctattgtcatcgaccaaactgaagccttggtttcaatcgatatt
aactccgctaagtctactaaaggctcagacgtcgctgaaaccgcgtatcataccaattta
gaagcagctgatgagattgcgcgtcagttacgcctacgtgatatgggtggcttgattgtc
attgattttattgacatgaatgacaataagcatcaaaaagaagtcgaaaagcgtctagtt
gatgcgaccaaatatgaccgtgcccgtgtccagtttggtgaaatatccaaatttggtttg
atggagatgagtcgtcaacgtctgcgcccatcattagaagagtctaccggttacatctgc
ccacgttgccacggcaatggtatgattcgtgatctgcgctcactatcgctatctatcatg
cgtcaaattgagcaaatcgctcttaaagagcgtcaaggcgaagtgcaagcggaagtacct
actgatatcgctgcgttcttattgaatgaaaaacgcgacagcttggtttatctcgaacaa
gacagcggcacacgtattactatcctgccgcatgctcatctagaatcgcctaactttaaa
ctacacttcaaccgtgatggttttgcaccgacaagctatgaacgtattacagatactcag
caacaagagcatagcgaccttggttacgatgtcgattggcagactgcggaaaaagaacgt
cctgagcagcaacctactcgtcagccacgtaagacagctgacaatcaaggcagtcaaaca
gacgatcgctcaaacaatcaaaatagcggccgctcacagccagcagctagtggccagagt
aacaaccaaaactctagctcaagcactgaaacaaagagcgcagctagccatagtaataat
cgtaatcaaaataacaataatagccaaagcaacaatgaaagcacccaagtctcttcaacg
cgtgctgctacaaataacgttccgctaaaaaaccaaacgacccctactcctgtagccact
cagtctgtacctgctgcgcagccaaaagctgtcgcttggttatctaatctgtttgcccaa
gcgccacaagcacaaactgcaaatagtattagtagtcgtgatgcagcggaagctattgaa
gcgttagttaatactggtgcccagagcttaggttcgttcggtcaagttgataatacggca
ttggataataaccaacgttcatcatcaacgcaggatagtcatcagcaaaacgtacgtcca
caagacgacaaccatgctcaagctgtaactcagcagtcaagaggcagtgctgacaatgac
agtgataatggcgacgataataaagacagcaatggcgacgacagaagaaagcgtaaggca
cgcaaatcaagatcatctaaaccgcgtcaaagaaaagaacaacgcgatgacaatgatagt
gtagataacagcacagacagtacaaatgacagcactcagtctgatacacaaaataagcgt
gagcacgacaataaacgcggtaacgatcgtaatcgtaatcgccaagacaaccgtcaagat
agccgtcaggacaatcgccagcataatcggaatgatagcgaaagtcaggacgatactgcc
actgaagagcaatctcgtacgaagcgcaaaccacatagtcagcgtaactcacgtggtaag
cttgaacgtggcgagaccttaacagctgacaataatgcgaagcaaagcaatcaacaatca
gctacgaacggtaagtcgcaggcaagtgctcgacgcaaccaagatcctaacgaagtcata
ttacaggtcaacgaagcgccgactaagcttaaagcatcagaagtggtacatctgtcttta
gatgatagcaagtctggacaaacggcgcataaacctacggatatgcaagaagctgagcct
aatgtagctgtcgatgataaagacctaacggctacaccacgtgatgccgataagtcgaaa
gagacagtaactaaaaggattgagagcacagatgccgacacggttaaaaccgaatcgact
gaacgcttagctgaggaaaaaccacagagtaatgagcacaaagcaaagccaactgaggac
aataaatcatcggttgagcagagtgaaaaagtctctgatgctaaaacaatcactacagaa
tcggtaaaagagtcagcacaagcgtcagagacggctaaagcagatacgacacaagcgtta
gtcgatgctcagcaatctgacgataatagtgaagttgaagcaactagcagcactaaaagt
agcactgcaaataatagcaatgcagacactaatagtgatgtaaacagtaatagtgaggta
gacaacagcaagacaaagaatggcgctgtactcacgcttactcatgatgcattatttgct
acacgttatgtggccgctcagaaattcgggcaagcaagcaatgatcctcgtgtagtacgt
cgtcagcagtcagcaccagtagctgagtcagatgctaaagcaagcactgtagcaagcacc
gtaccgactactattcgcggtactgttggtgagttcattcatgcgacgttagcagatgca
caaagccgcttagcggataatggggtgattagttgcttcattgatgctattgaggcgcat
actcagcaagccaaacctgctgctgttgaagttggtgacgttgatagtgttaatgataaa
acttttgactttagcaactatggttatcagcctctagatgctgattacttgactcgcttt
gatgcgatgacccaagcagtcagtcagtttgcagcagcgcaaggtaaaacagaggttgca
ccacgtgctattggcaagcgtgctagcaatgacccacgtggacagcatcctgattatcat
gctgacgaaccaaagcaggcgacattgaacgttcctgatgagtcgcttgcggagccaaaa
tcagatactcaatctcaagagatagtagagattaatgctgctgagacgtctgaaatggct
gagactgtcaacgatgctccatctgaaactgctgaaactgctgaaactgagaatgaggct
attcaagctgacaatggtcaaattgatgctcatgaaactgaagcagcagcattgaccagt
gaggtacaagcagacgatatcagtactgaaagtgagcaattactaaaagctgatcaaatg
ctagaagaaaacaaggctgttgagcttactgactctatcaaagaggacagtcaagccggt
aaatctaagacgactattgccagttataaaaatatgattgaaagtgtcgctgagcagctg
ctgccacaaactggcatgtttaatttgaccacgccaaaggttccaaaagcacgcagtcgt
aaaccaaagactgaccacgtgaagccaacacaagctgagaaatcagaaaatgataattca
gatagcgaaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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