KEGG T05098: PSPO

Pseudoalteromonas spongiae: PSPO_a0239

Entry

PSPO_a0239        CDS       T05098

Symbol

trmA

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

pspo Pseudoalteromonas spongiae

Brite

KEGG Orthology (KO) [BR:pspo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pspo03016]
    PSPO_a0239 (trmA)
Enzymes [BR:pspo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     PSPO_a0239 (trmA)
Transfer RNA biogenesis [BR:pspo03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    PSPO_a0239 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Met_10 MTS Methyltransf_4 Methyltransf_12 Methyltransf_15 Methyltransf_11 DREV PrmA Cons_hypoth95 Tudor_RapA

Other DBs

NCBI-ProteinID:

ATC97482

UniProt:

A0A290SZ77

Position

I:complement(228044..229141)

AA seq 365 aa
MPVIQIDTSQYDEQLAEKEQRISQQFAQFNAPKLEVFASEAKNYRQRAEFRVWHEGEDLF
HIMFDPETKEKIRVDQFDPAAPLICELMPRLLELLKPNEILRRKLFQIDYLSTLSGQILV
SLIYHKQLDDEWVNEANKLKALLKEEFDIDFIGRARKQKIVLGEEYVIEKLNVDNRELVY
QQVENSFTQPNAKLNEQMLEWAIDVSKPLNNDLLELYCGNGNFSIALAPSFNRVLATEIS
KSSVKSAQFNIAENKINNLDIIRMSSEEFTMAMNGEKEFSRLNGIDLKSYNCQSILVDPP
RAGLDKDTTDLVQGYDNIIYISCNPDTLERDLQQLTETHTIARFAIFDQFPYTHHIESGV
FLTRK

NT seq 1098 nt +upstreamnt +downstreamnt
atgcctgtaattcaaatagatacttcacaatacgacgaacaacttgctgaaaaagaacaa
cgtatcagccaacaatttgcgcagtttaacgcgccaaaattagaagtatttgcgtctgaa
gcaaaaaattacagacaacgtgcagagtttcgcgtgtggcatgaaggtgaagatttattt
cacattatgtttgaccctgaaacaaaagagaaaatcagagttgatcagtttgatcctgca
gcaccattaatttgtgaattaatgcctcgtttgttagagctactaaaaccgaatgaaatt
ttacgtcgtaaactctttcaaattgattatttgtcgacattaagcggacaaattcttgtt
agcttgatttatcacaagcaacttgatgacgaatgggtaaacgaggctaataagctaaag
gcgttactaaaagaagagtttgatatcgattttattggccgagctcgcaagcaaaaaatt
gtgcttggtgaagaatatgtcattgaaaagctgaatgtagataatcgtgaacttgtttat
cagcaagttgaaaatagctttactcagccaaacgccaagctaaatgagcaaatgctcgag
tgggcaattgatgtctcaaaacctcttaataacgatctgctggaactttattgtggtaac
ggtaacttttcaattgcattagcgccaagctttaatcgcgtactagccaccgaaatttcc
aagtcttcggttaagtctgcgcaatttaatattgccgaaaacaaaatcaacaacctcgat
ataatccgtatgtcgagtgaagagttcactatggcaatgaatggtgaaaaagagttttcc
cgcttaaatggtatcgaccttaaaagttacaactgtcaaagtatattagttgatccgccc
cgtgcaggtttagacaaagacaccactgatttagtgcaagggtatgacaacattatctat
atttcatgtaatccagatacgctggaaagagatttgcagcaactaactgaaactcatacc
atcgcgcgttttgccatttttgatcagttcccgtatacccatcatatcgaatccggcgta
tttttaacgcgcaagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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