KEGG   Pseudoalteromonas spongiae: PSPO_a0842
Entry
PSPO_a0842        CDS       T05098                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pspo  Pseudoalteromonas spongiae
Brite
KEGG Orthology (KO) [BR:pspo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspo03019]
    PSPO_a0842 (rnc)
   03009 Ribosome biogenesis [BR:pspo03009]
    PSPO_a0842 (rnc)
   03036 Chromosome and associated proteins [BR:pspo03036]
    PSPO_a0842 (rnc)
Enzymes [BR:pspo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PSPO_a0842 (rnc)
Messenger RNA biogenesis [BR:pspo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PSPO_a0842 (rnc)
Ribosome biogenesis [BR:pspo03009]
 Eukaryotic type
  90S particles
   RNase
    PSPO_a0842 (rnc)
 Prokaryotic type
  rRNA processing factors
   PSPO_a0842 (rnc)
Chromosome and associated proteins [BR:pspo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PSPO_a0842 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ATC98007
UniProt: A0A290T2B1
Position
I:802602..803279
AA seq 225 aa
MTKDVNLLFKKIGYSFNDVRLLEQAMTHRSYRGAHNERLEFLGDSILSFVIADALYHQFP
KAREGDLSRMRSTLVRGQTLAEFGVEFELGDFLRLGPGELKSGGYRRESTLADAVEAIIG
AVFLDSDIETCRELVLNWYQTRLQAITPGHNQKDPKTLLQEYLQARKIPLPSYNVIDTKG
QAHNQVFTVECLIENKPQVVAKGSSRRKAEQKAAELALKMIKDDA
NT seq 678 nt   +upstreamnt  +downstreamnt
atgactaaagacgtaaacttattatttaagaagataggttacagctttaacgacgttcgc
ttgctagagcaagcaatgacccatagaagttaccgaggtgctcacaatgagcgccttgag
tttttaggtgactcgattttgagcttcgttatagctgatgctttgtatcatcaatttcca
aaagcccgtgaaggcgatttaagccgtatgcgctctacgctagtacgcggtcaaacattg
gcggaatttggtgtggaatttgaacttggcgattttcttcgccttggtccgggtgagctg
aaaagcggtggttatcgccgtgaatcaacgcttgctgatgccgttgaagcaattataggt
gctgtatttttagattcagacattgaaacatgtcgtgaattagtacttaactggtatcaa
acgcgtttacaagcaattaccccagggcacaatcaaaaagacccaaaaaccttgctacaa
gagtatctgcaagcccgcaagatccctctgcctagctataatgtaattgatactaaaggc
caagcgcacaatcaagtatttacggttgagtgcttaattgagaataaacctcaagtagta
gctaaaggaagttcgcgtcgtaaagcagaacaaaaagcagctgagcttgcattgaagatg
attaaagatgacgcttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system