KEGG   Pandoraea sputorum: NA29_05950
Entry
NA29_05950        CDS       T03554                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pspu  Pandoraea sputorum
Pathway
pspu03420  Nucleotide excision repair
pspu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NA29_05950
   03430 Mismatch repair
    NA29_05950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspu03400]
    NA29_05950
Enzymes [BR:pspu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NA29_05950
DNA repair and recombination proteins [BR:pspu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NA29_05950
   MMR (mismatch excision repair)
    Other MMR factors
     NA29_05950
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12
Other DBs
NCBI-ProteinID: AJC15716
UniProt: A0A239S707
Position
371969..374053
AA seq 694 aa
MSEQPSAAARDPWAELNDRQREAVDFGVDDDGAPGGPLLVIAGAGSGKTSTLAHRVANLI
VRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLSSTQPPSLPWAGTFHAIGARLLRD
FAPRIGLSEAFTIHDRSDAEDLLGLVRHDLGFSATQSRFPLKGTCLSIYSRVVNSQAPLA
EVLARHFPWCAQWEAQLKQLFGGYVDAKQAQHVLDYDDLLLYWAETMGAPELARELDARF
DHVLVDEYQDTNRLQAQILLSMKPDGRGLTVVGDDAQSIYAFRAATIRNILDFPGQFAEP
AHVVTLERNYRSTQPILDASNAVIAESNERYAKALWTDRLSDRLPQLVNVSDESGQARWV
ADQVLAQRETGTRLTQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAHVKDMLS
ILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMAQSATPAQVLAEFKPPSGAATQWR
AFVEVFMTLHDTRLAWPADVDLALRWYAPLLTQRFDDAAVRQADLEQLARIANTYGSREQ
FLTELTLDPPDATSAQSGPPLLDEDYLILSTIHSAKGQEWHSVYVLNVVDGCIPSDMSTG
DDEDIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGLGDRHVYGTRSRFVSDKMLPLY
DIFPKPREDDVPRGPVGDVTVHIDVARKLRNAWS
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgtcagaacagccgtccgccgccgcccgcgatccttgggccgaactcaacgaccgtcag
cgtgaagccgtcgacttcggtgtggacgacgatggtgcgcctggcgggccgttgctcgtg
attgccggggcggggtcgggcaagacgagtacgctcgcgcaccgggtcgcgaatctgatc
gtgcgtggtgccgatcccaatcgaatcctgctgcttacgttctcgcgtcgtgccgctggc
gaaatggagcgtcgcgtgggggccgtgttgcagaaggtactggggctgtcgtcgacacaa
ccgccgtcgctgccgtgggccggtacgtttcacgcgattggcgcacggttgctgcgcgat
ttcgccccacgtatcgggctgtcggaagcgttcaccattcatgaccgcagcgacgccgag
gatctgctcgggctggtgcggcacgatctgggtttttccgcgacgcagtcgcgtttcccg
ctcaaaggcacgtgtctgtcgatctactcgcgcgtggtgaacagtcaggcaccgctcgcc
gaagtgctcgccaggcacttcccgtggtgtgcgcaatgggaagcgcaactcaagcagctt
ttcggcggttatgtcgacgcgaaacaagcgcagcatgtgcttgattacgacgacctgctg
ctgtattgggctgagacgatgggtgcgccggaactggctcgtgagcttgacgcccgcttc
gatcatgtactcgtcgacgagtatcaggacaccaaccgcttgcaggcgcagattcttctc
tcgatgaaaccggacgggcgtggcttgacggtcgtgggcgacgatgcgcagtcgatctac
gcgtttcgcgcggcgacgatccgcaacattctcgatttcccgggtcagtttgccgagccg
gcgcacgtggtgacgctggagcgcaattatcggtcgacgcagccgattctcgatgcgtcc
aatgcggtgatcgccgagtcgaacgagcgctacgcgaaggcgttgtggacggaccggcta
tcggaccggttgccgcaacttgtcaacgtgagcgacgaatcggggcaggcgcgttgggtc
gcggatcaggtgctggcgcaacgtgagaccggcacgcgactcacgcaacaggcggtgctg
tttcgcacggggagtcacagcgcggcgctggagctggaactcacgcgtcgcaatattccc
ttcgtgaagttcggtgggttgaagtttctcgaagcggcccacgtgaaggacatgctgtcg
atcttgcgatgggcgcataacccggccagccggttgtcgggttttcgcgttgcgcagttg
atccccggcatcgggccggtgagcgccacgcgcttgctcgatgccatggcccagtccgcg
acacccgcgcaggtgctggccgagttcaagccaccgtcgggtgccgccacgcagtggcga
gcgttcgtcgaagtcttcatgacgttgcacgacacgcggctggcgtggcctgcagacgtg
gatctggcgctgcgctggtacgcaccgctgctcacccaacgtttcgacgatgccgccgtg
cgtcaggccgatctcgaacaactcgcgcgcatcgccaacacgtacggctcgcgcgagcaa
ttcctgaccgagctgacgctcgacccacccgatgccacgagcgcacaatccggtccgccg
ctcctcgacgaggattacctgatcctgtcgacgattcacagcgccaaggggcaggagtgg
cattcggtgtacgtgctcaacgtggtcgatggctgtatcccctccgatatgagcaccggg
gacgacgaagacatcgaggaagagcgacgtctgctttacgtggcgatgacgcgtgcaaaa
gagtcgctgcaactcgttgtgccgcagcggttctacgtccatcagcaaaccggtctgggc
gatcgccatgtgtacggcacgcgcagccgtttcgtgtccgacaagatgctgccgctgtac
gatattttcccgaagccgcgcgaggacgatgtgccgcgcgggccggtcggcgacgtcacg
gtgcacatcgacgtcgcgaggaagcttcgcaatgcctggtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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