KEGG   Pandoraea sputorum: NA29_09745
Entry
NA29_09745        CDS       T03554                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pspu  Pandoraea sputorum
Pathway
pspu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NA29_09745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspu03019]
    NA29_09745
   03110 Chaperones and folding catalysts [BR:pspu03110]
    NA29_09745
   03029 Mitochondrial biogenesis [BR:pspu03029]
    NA29_09745
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspu04147]
    NA29_09745
Enzymes [BR:pspu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     NA29_09745
Messenger RNA biogenesis [BR:pspu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NA29_09745
Chaperones and folding catalysts [BR:pspu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   NA29_09745
Mitochondrial biogenesis [BR:pspu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    NA29_09745
Exosome [BR:pspu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   NA29_09745
  Exosomal proteins of other body fluids (saliva and urine)
   NA29_09745
  Exosomal proteins of breast cancer cells
   NA29_09745
  Exosomal proteins of colorectal cancer cells
   NA29_09745
  Exosomal proteins of bladder cancer cells
   NA29_09745
SSDB
Motif
Pfam: Cpn60_TCP1 LCIB_C_CA
Other DBs
NCBI-ProteinID: AJC16263
UniProt: A0A239SB52
Position
1209269..1210915
AA seq 548 aa
MAAKEVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGSISANSDTSIGDYIAKAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINTPEKQVAILENPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEIGLTLEKATLAELGQAKRIEIGKENTIIIDGAGEAVNIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARVAVSDLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVANVVAGKGNYGYNA
SSGEYGDLVEMGVVDPTKVTRTALQNAASVSGLLLTTDCAVAELPKEDAPMAGGMGDMGG
MGGMGMGM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagaagtcgttttcggcgatgccgctcgtgccaagatggtcgagggtgtc
aacatcctcgccaacgccgtcaaggtgaccctgggcccgaagggccgtaacgtcgtgctc
gagcgcagcttcggcggcccgaccgtgaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgacaacgccggcgacggtaccaccaccgcaacggtgctggctcagtcgatcgtt
cgcgaaggcatgaagtacgttgcctcgggcatgaacccgatggacctgaagcgcggtatc
gacaaggctgtcgccgctgctatcgaagaactgcgcaagatcagcaagccctgcaccacg
aacaaggaaatcgctcaagtcggctcgatctcggccaacagcgacacctcgatcggtgac
tacattgccaaggcaatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcaagacgagctggacgtcgtcgaaggtatgcaattcgaccgcggctacctc
tcgccgtacttcatcaacaccccggaaaagcaagtcgcgatcctggagaacccgttcgtc
ctgctgttcgacaagaaggtgtcgaacatccgtgacctgctgccggtgctcgagcaagtc
gccaaggctggccgtccgctgctgatcatcgctgaagacgtcgagggcgaagccctggca
acgctggtggtcaacaacatccgtggcatcctgaagacctgcgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgccgaagaaatcggcctgacgctggaaaaggccacgctggctgagctgggtcaagcc
aagcgcatcgaaatcggcaaggaaaacaccatcatcatcgatggcgccggtgaagccgtg
aacatcgaagcgcgcgtcaagcagatccgcgcccagatcgaagaagccaccagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgcagtgatcaag
gtcggtgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgcgtggaagacgcgctg
cacgctacccgcgctgccgtggaagaaggcatcgtcccgggcggcggtgttgcgctgctg
cgtgctcgcgtggccgtgtcggacctcaagggtgccaacgccgaccaggacgccggtatc
aagatcgtgctgcgcgcgatggaagagccgctgcgtcagatcgtcaccaacggtggcgaa
gaagccagcgtcgtcgtggctaacgttgttgcaggcaagggcaactacggctacaacgca
tcgtcgggcgagtacggcgatctggtggagatgggcgttgtggacccgaccaaggtcacc
cgcaccgcactgcaaaacgccgcttcggtgtcgggcctgctcctgacgaccgactgcgcc
gttgccgaactgccgaaggaagatgctccgatggccggcggtatgggcgacatgggcggt
atgggcggcatgggcatgggcatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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