KEGG   Pandoraea sputorum: NA29_13360
Entry
NA29_13360        CDS       T03554                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pspu  Pandoraea sputorum
Pathway
pspu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NA29_13360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspu03019]
    NA29_13360
   03016 Transfer RNA biogenesis [BR:pspu03016]
    NA29_13360
Enzymes [BR:pspu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     NA29_13360
Messenger RNA biogenesis [BR:pspu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NA29_13360
Transfer RNA biogenesis [BR:pspu03016]
 Prokaryotic type
  tRNA degradation factors
   NA29_13360
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 KhpA-B_KH Phage_tube DUF5813
Other DBs
NCBI-ProteinID: APD12390
Position
2070566..2072722
AA seq 718 aa
MQMFNKVVKSFQWGQNTVRMETGEIARQASGAVLVDMDDTVVLATVVGAKKAKAGQDFFP
LTVDYLEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPIRPLFPEGFYNEVQVVVQVV
SLNPEVPADIPALIGASAALAISGLPFNGPVGAARVAYVDSQYVLNPSREQIAKSKLDLV
VAGTEQAVLMVESEAQELPEDVMLGAVVFGHEQMQTAINAIHELVRDGGKAEWEWAPAAK
NDALISQVGELAEGQLRAAYQTREKQARTQQLRAVSTDVIAKLAEAAAAKGEAAPDDIEV
GNILFDLEAKIVRSQILAGEPRIDGRDTRTVRPISIRTGVLPRAHGSALFTRGETQALVV
ATLGTKSDEQIIDALQGEYRDRFMLHYNFPPFSTGETGRVGSPKRREIGHGRLAKRALVA
CLPGADDFGYTVRVVSEITESNGSSSMASVCGGSLAMMDAGVPMTSPVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTSNGVTALQMDIKIQGITKEIMQVALAQAKEGRLHI
LGKMTEAQSGVRTELSEFAPRMVTIKINPEKIRDVIGKGGSVIRALTEETGTSIDISDDG
VVTIASPSAEGIAEAKRRIELITVEVEVGQVYDGTVLKLLEFGAIVSVLPGKDGLLHISE
IANERIKDINEYVKEGQAVRVKVIQQDDKGRLRLSHKALTEEEKQGGALLVKREGDAQ
NT seq 2157 nt   +upstreamnt  +downstreamnt
gtgcaaatgttcaataaagtcgtcaagtctttccaatggggacaaaacacggttcgcatg
gaaaccggtgagatcgctcgccaggcatccggtgctgtgctcgtcgacatggacgatacc
gtcgtgctcgccacggtcgtgggtgcgaagaaggccaaggctggccaggatttcttcccg
ctgacggtcgactaccttgaaaagacttacgccgccggcaagatcccgggtggcttcttc
aagcgtgaaggccgtccgtcggaaaacgaaacgctgacgtcgcgcctgatcgaccgtccg
atccgcccgctgttcccggaaggcttctacaacgaagtccaggtggtggtgcaggtcgtc
tcgctgaacccggaagtcccggccgatatcccggccctgatcggtgcttcggccgcgctg
gccatctcgggtctgccgttcaacggcccggtcggcgccgcccgcgttgcctacgtcgac
agccagtacgtgctcaacccgtcgcgcgagcagatcgccaagtcgaagctcgacctggtc
gtcgccggtacggagcaagctgtgctgatggtggaatcggaagcacaagagctgccggaa
gacgtgatgctgggcgcagtcgtgttcggtcacgagcaaatgcaaacggccatcaacgcg
attcacgaactcgtgcgcgacggtggcaaggctgagtgggaatgggccccggctgccaag
aacgacgcactgatctcgcaagtgggcgagttggccgaaggtcaactgcgcgctgcatac
cagacgcgtgaaaagcaagcgcgtacgcaacaactgcgcgctgtgagcaccgacgtgatc
gccaagctggccgaagccgcagcggctaagggcgaagctgcaccggacgacatcgaagtc
ggcaacatcctgttcgatctggaagccaagatcgtccgtagccagatcctggcgggtgag
ccgcgtatcgacggccgcgacacgcgcaccgtgcgcccgatctcgatccgcaccggcgtg
ctgccgcgtgcccacggttcggcgctgttcacgcgtggcgaaacgcaggcactcgtggtg
gccacgctgggcaccaagagcgatgagcagatcatcgacgcgctgcaaggcgagtaccgc
gatcgcttcatgctgcactacaacttcccgccgttctcgacgggcgaaacggggcgcgtg
ggttcgcccaagcgtcgcgaaatcggtcacggccgtctggccaagcgcgcgctggtcgcg
tgtctgccgggtgccgacgatttcggttacaccgtgcgtgttgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcatcggtctgcggcggtagcctcgccatgatggacgcc
ggtgtgccgatgacctcgccggtcgccggtatcgccatgggtctgatccttgaaggcaac
aagtttgccgtgctgaccgacatcctcggcgatgaagatcacctgggcgacatggacttc
aaggtggccggtacgtcgaatggcgtgaccgcactgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctggcgcaagccaaggaaggccgtctgcatatc
ctgggcaagatgacggaagcccagtctggcgtgcgtacggagctgtcggaattcgcaccg
cgtatggtcaccatcaagatcaatccggaaaagatccgtgacgtgatcggtaagggtggt
tcggtgatccgcgcgttgacggaagagactggtacgagcatcgacatttcggacgacggc
gtggtgactatcgctagcccgagcgccgaaggtattgccgaagcgaagcgtcggatcgaa
ttgatcacggtggaagtcgaggtcggtcaggtctacgacggtaccgtgctcaagctgctc
gagttcggcgccatcgtctcggtgctgccgggtaaggacggtctgctgcacatctcggaa
attgccaacgagcgcatcaaggacatcaacgagtacgtcaaggaaggtcaggccgtgcgc
gtgaaggtgatccagcaagacgacaagggtcgtctgcgtctgtcgcacaaggcactgacc
gaagaagagaagcaaggcggtgcactgctggtcaagcgcgaaggcgacgcccagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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