KEGG   Paraburkholderia sprentiae: BJG93_15255
Entry
BJG93_15255       CDS       T04610                                 
Name
(GenBank) RNB domain-containing ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
pspw  Paraburkholderia sprentiae
Brite
KEGG Orthology (KO) [BR:pspw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pspw03016]
    BJG93_15255
Enzymes [BR:pspw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BJG93_15255
Transfer RNA biogenesis [BR:pspw03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BJG93_15255
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: APA86601
UniProt: A0A1I9YJW8
Position
1:complement(3088654..3090786)
AA seq 710 aa
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPTAAELMQQADAL
AQEIDLDFLWECAPDDEFPFATLGAEYFGASFGATERAALVLRMHGSPVYFRRKGRGMYQ
RAPQEQLKMALAGLERKRQQALVQAQYEEELKAGRLPEAFAGGKALALLTKPDKNTIEYK
ALEGAAAARGISQARLMLECGAIASPRALHEAKFLSEFFPHGTGFPPVAAANVPDDLPQA
AIEAFSIDDVTTTEIDDAFSVEHLADGRVRIGVHIAAPALGIERGDEVDAIARARLSTVY
MPGDKITMLPDSVVETFTLAEGGYRPALSLYVIVNRDTQEIVASETRAERVFVKNNLRHN
TLDGIVTEEALAEGTGEYPHKDDIAVLWPFAQALFEKRQTARAGYGLRREVQRNSDFNFY
VDGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPSGPKRT
RMQTNAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYTAYADYQRRMEYFWCLRWLTQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLQMEVMSIDELTIEASVRLLHVLDAPTVTSGAEAEEGEDEGDEALLDASDD
SAESEAEAQAEADGSHPNDTPSAEESAPSGDGNDAANPADNDQHITEPGR
NT seq 2133 nt   +upstreamnt  +downstreamnt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcagcgtgctgtcgcgtcag
ggcgacgcgtttcaggtcgagttgccgggcggccggcgcgcgaaggtgcgcgcgaaggat
gtgctgatcgagttcgacaagcccaccgcggccgaactgatgcagcaggccgacgcattg
gcgcaagagatcgatctcgacttcctgtgggagtgcgcgccggacgatgaattcccattc
gcgacgctgggcgccgagtacttcggcgcgagcttcggcgcgaccgagcgtgcggcgctg
gtgctgcgcatgcacggctcgccggtgtacttccgccgcaagggccgcggcatgtaccag
cgcgcgccgcaagagcagctgaagatggcgctcgcgggcctcgagcgcaagcgtcagcag
gcgctcgtgcaggcgcagtacgaggaagagctgaaggcaggccgtctgccggaagcgttc
gccggcggcaaggccctcgcgctgctgacgaagcccgacaagaacaccatcgaatacaag
gcgctcgagggcgccgcggccgcgcgcggcatctcgcaggcgcggctgatgctcgaatgc
ggcgcgatcgcgtcgccgcgcgcgctgcacgaggcgaaattcctctcggagttcttcccg
cacggcaccggcttcccgcccgtcgcggccgcgaacgtgcccgacgatttgccgcaggcc
gccatcgaagcattctcgatcgacgacgtcaccacgaccgaaatcgacgacgcgttctcg
gtcgagcacctggccgacggccgcgtgcgtatcggcgtgcacatcgccgcgccggcgctc
ggcatcgagcgcggcgacgaggtcgatgcaatcgcgcgcgcgcgtttgtcgacggtctat
atgcccggcgacaagatcacgatgttgcccgacagcgtcgtcgaaaccttcacgctcgcc
gaaggcgggtatcgaccggcgctgtcgctgtacgtgatcgtcaatcgcgacacgcaggag
atcgtcgcgagcgaaacgcgcgccgagcgcgtgttcgtgaagaacaacctgcgccacaac
acgctcgacggaatcgtcaccgaagaagcgcttgccgaaggcaccggcgagtatccgcac
aaggacgatatcgccgtgctgtggccgttcgcgcaggcgctgttcgaaaagcgccagacc
gcgcgcgccggctacggcctgcgccgcgaagtgcagcgcaattccgacttcaatttctac
gtcgacggcgagcacatcacgatcacgccgcgccggcgcggctcgccgctcgacacgatc
gtcgcggaactggcgattctcgcgaactcgtcgtggggcgcgttcctgcacgaccacggc
gtgccgggcatctatcgcacgcagcgcgcgttcggcgcgccgagcggcccgaagcgcacg
cgcatgcagaccaacgccgcgccgcacgaagggctcggcgttccgcagtacgcgtggagc
acgtcgccgctgcgtcgctacgtcgacctcgtgaatcagtggcaactgatcgcgtgcgtg
cagcatggcgtgaccgccaagctcgccgcgccgttcaagccgaaggacgccgatctgttc
gcggtcgtgcaaggcttcgacgacacctacaccgcatacgccgactaccagcgtcgcatg
gagtacttctggtgtctgcgctggctcacgcaggaaaaccgcaagcaggtggtcgcgtcg
gtggtgaagggcgatctggtgcgtctcgaggaaattccattgctgctgcacgtgcccggc
ctcggcgtgcacgcgcgcggcacgcgtttgcagatggaagtgatgtcgatcgatgagctg
acgatcgaagcctcggtgcgtctgttgcacgtactcgatgcgccgaccgtgacgagcggc
gccgaagccgaagaaggcgaggacgagggcgacgaagcgctgctcgacgcatcggatgac
agcgccgaaagcgaagcggaagcccaagccgaagccgacggctcccatcccaacgacacc
cccagcgctgaagaatccgcgccgagcggcgacggcaacgacgccgcgaaccccgccgac
aacgaccaacacatcacggagccgggacgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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