KEGG   Punctularia strigosozonata: PUNSTDRAFT_119725
Entry
PUNSTDRAFT_119725 CDS       T03131                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
Organism
psq  Punctularia strigosozonata
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 18877187
NCBI-ProteinID: XP_007382378
JGI: 119725
Position
Unknown
AA seq 1723 aa
MNIAHSIPSVVQSVSFSFLTAEDIRRISVKQIINPILLDDLNRPNIGGLYDPALGPSEKQ
DICTTCRLNYFTCPGHYGHIELPSPVFHPLFMTNMYHVLRTTCLFCHKFKVGPTTLCVYA
GKLRLAEHGLLVAAKSLDDLIPQKKNKGSAQADGDEDEDGVIESSEDFAKRVNVYVDLQL
ARASSSKRDDYKDGLVYQARKDLIQEFIRISQLKKCMNCGAHGYTFRKEGHTKIIEYDLT
RKQKEQNIASGRRRPDVLHSVYHSSNAHLKETTGDDSDVSMSDAEPAGDPTMSDEDQEMA
SVEDENLHQIPTGPAKAANGTIKGKRGRNERVMAPEECRAHLRRLFSNEPKMCSLIFGRH
GPFSKFRPDGHATASADIFFMDAIPVSPTRFRPPAKMGDTLFEHAQNQLLTRVLNTSYKL
RDLTRDLRAASVKSVQYDEATRRRILGALLDALVQLQVDVNSFLDSSKNPQPVRQGQLPP
AGVKQGLEKKEGLFRQHMMGKRVNYAARSVISPDVNIEPNEIGIPPVFARKLTFPESVTP
ANVHEMRQLVINGARAYPGATMVEFEDGHQQSLDVMSVEARTALANQLLKPPEGERNSSK
HGLYTRTTAANKKVYRHLRDGDVLILNRQPTLHKPSMMVHKARVLRGEKTIRMHYANCNS
YNADFDGDEMNIHFPQNQVARAEAMMIANTDNQYLVTTSGKPLRGLIQDHVVAGVWMTSK
EAFFTREEYFQLLYGALRPEEEGGHITGRLVTLPPTIWKPNALWTGKQIISTVLLNITPS
NARGLNTEFKAKVPGYLWGKDSIEEDKVVFVDGELLCGVLDKSSFGASEYGMVHSVYELY
SSEVAGRLLGILSRLFTKFLQHRAFTCRMDDLTLTPTGDAKRRDILQNGRNLGTEAAMEN
FPSLVQVPPVDKPGALESLLREVLRDDSKMAGLDVTVKTKLATLTKAIADAVMPRGLSRQ
FPLNHMQTMTLSGAKGSAVNAQQISCALGQQELEGRRVPVMISGKTLPSFKAFETKAIAG
GYVASRFLTGIKPQEFYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLKVHYDYTVR
GSDDSIYQFHYGGDALDVTKQKYLYQFDFTSRNELSLINKYQPGRINRIVNDSDALEYSK
KIIRKSAPKRHKYAPILSKFNPSLYLGATSERFAESVESYLKFNPHGLLKSRTTENAVEL
RRRHPLLTKDRFRLLMNVQYMRALVDPGEAVGLLASQGVGEPSTQMTLNTFHFAGHGAAN
VTLGIPRLREIVMTASKQPKTPSMIVPIRPDVGDRELETFCKQANRLSLSQVIDEITVTE
KLVTNGKARRKEFNIRLAFFPREEYEREYHVSPPEILAAFGARFALILKKEILTEMKRLD
ADLKGLMAALGKGKAVKDTTGADAADNDDDVDEGARGGNRGEDERSEIGDGDAEDAKHER
QRKEQSSYESDGGDDDLDDDVDYGAKGIAEAYANVDKEMEAEELTDAQPVVLQAKKLVNQ
SSAVQDEFKRTLKFAKSLKFDDSGCSLELEFEEDMPKLLLVGVVERTCAKTIVREIPGIT
ECFKGTDAKKRAQITTNGSNFRGVWEFSALSEVSIIDHDGIYSNDIYGFLMTYGVEAARS
AILREISGVFDAYKIDVDGRHLELIADYMTFDGGYKPFNRKGISTHSSPLMKASYETTAA
FLSDATLYGDFDTLTSPSGNIVLGKPSTTGTGSFDVIMPVTVS
NT seq 5172 nt   +upstreamnt  +downstreamnt
atgaacattgcgcactccatcccgtccgtcgtgcagagcgtctccttctcattcctcacc
gccgaagacatccgacgtatctctgtcaagcagatcatcaaccccatcctccttgatgac
ttgaaccgaccaaacatagggggactatatgaccccgcgcttggaccaagcgaaaagcag
gacatatgtactacttgtcggctgaactacttcacttgccctggccattatggtcatatt
gagcttccttctcccgtctttcatcccttgttcatgacgaacatgtaccatgttctccga
acgacatgcctcttctgtcataaattcaaagtcggtcccaccacgctctgtgtatatgcg
ggaaagcttcggctcgctgaacatggcctgttggtagcggcgaaaagcctcgacgatctt
attcctcagaagaaaaacaagggtagcgcccaggcggacggggacgaagacgaagatggg
gttatcgaatcaagcgaagacttcgcgaaacgtgtaaatgtgtatgtcgatctccaactt
gcgcgagcctccagtagcaagagagacgactacaaggatggactagtatatcaagctcgc
aaggacctcatccaagaattcatccgcatatcgcagctcaaaaagtgtatgaattgtggc
gcgcacggatataccttccgcaaagaaggacatactaaaatcatcgagtacgacctcact
cgtaaacaaaaggaacagaatatcgcatcgggaaggcgccgaccagatgtcctccattcc
gtctaccattcctccaacgcacacttgaaggagacgactggagacgactccgacgtgtct
atgtctgatgcagagcctgcgggcgaccccacgatgtccgacgaagaccaggagatggcc
agcgttgaagacgagaacctgcaccagattccgacaggacctgccaaagcagccaatggg
accatcaaaggcaaacgtgggcgcaacgagcgagttatggcgccagaggagtgccgtgct
catctacgccggctgttcagcaatgaaccaaagatgtgctcgctgatctttggacggcac
ggaccattctcgaaattccgaccggatgggcatgccactgcgtctgcggatattttcttc
atggatgctatccctgtctcgccaactcgtttccgcccaccagcgaagatgggagacacc
ctattcgaacatgcacagaatcagctgctgacgcgggttctcaacacgtcatacaagcta
cgggatttgactagagacttgcgtgctgcatctgtgaagagcgttcaatacgatgaagcg
actaggcggaggatactcggcgcgttgttagacgccttggtgcaacttcaagtagacgtc
aatagcttccttgatagtagcaagaatccgcagcctgtacgacaagggcaattacctccc
gccggtgtcaagcaaggcctcgagaagaaggagggcttatttcgacagcatatgatgggc
aagcgtgtaaattatgctgcacgatctgttatttctccggatgtcaacatcgagccgaac
gagataggaatcccacccgtgttcgctcggaagttgacatttcctgagtcggtcacccca
gcgaatgtgcacgaaatgcgtcaactcgttatcaatggtgcgagggcataccctggtgct
acgatggtcgagttcgaggatggacatcagcaatcgcttgatgtaatgtccgtcgaagca
cggactgctctcgcgaaccaactgttgaaacccccagaaggcgagcgcaacagctccaag
catggtctatatactcgaaccacagctgcaaacaagaaggtttaccggcatttgcgagac
ggagacgtgctgattctgaaccgccaaccaacgctgcataaaccgagtatgatggtgcac
aaggccagggttctgcgaggcgagaagaccatacgaatgcactacgcgaattgcaattcg
tacaatgccgatttcgatggcgacgaaatgaacattcatttcccccaaaatcaggttgct
cgtgcggaggccatgatgattgccaacacagacaatcaatatttagtgactacatcaggt
aaacccttgcgcggtctcatccaagatcatgttgttgccggtgtgtggatgacgtccaag
gaagcgtttttcacgcgggaggagtacttccaacttctctacggtgctctccgtccagaa
gaggagggcgggcatatcaccggccgtttggtgactctgccacccacgatatggaaacct
aacgcgctgtggacaggcaaacagatcatttcgacggtgctcctgaacatcacgccgagt
aatgcacgtggactcaacacagaattcaaagccaaagtaccggggtatctttggggcaag
gattcgatagaggaggacaaggtcgtcttcgtagatggcgaattactttgcggcgttctg
gacaagtcttccttcggcgcaagcgaatacggcatggtccactccgtctacgaactttac
agctctgaagtcgccggacggctactcggtatcctcagtagactgttcacgaagttcttg
cagcaccgggcattcacctgtcgaatggacgatctgacgctcactcctaccggtgacgcc
aagcgcagggatatcctccagaatgggcgcaatcttgggacggaggccgctatggagaat
ttcccctcgctcgtgcaggttcctcccgtggacaagcccggtgctctggaaagtctactc
agggaagtcctgcgagacgatagtaaaatggctggccttgatgtcacggtcaagacgaag
ttggccaccctcacaaaagcgattgcggatgcggttatgcctcgcgggctatctcgccaa
ttccctctcaaccatatgcaaacgatgaccttatcaggagccaagggtagtgccgtgaat
gcgcagcaaatttcgtgtgcgctgggtcagcaagagctcgaaggccgtcgcgttccggtg
atgatcagcgggaagacgctaccttctttcaaagcttttgaaaccaaggccatcgccggt
ggttacgttgctagtcgtttcttgaccggcatcaaaccccaggagttctatttccattgc
atggcaggtcgggagggtttgatcgatacagcagtcaagacatcgcggtctggttatttg
caaagatgcctgatcaagcatttggaaggcctaaaggtccactacgactacaccgttcgc
ggtagtgacgactccatctaccagtttcactatggtggtgacgctcttgatgtcacgaaa
caaaagtatctctaccaattcgacttcacatcgcggaacgagctctccctcattaataag
tatcaacctggccgaattaaccgtatcgtcaacgacagtgacgctttggaatactccaag
aagattattagaaagtctgctccgaagcgtcacaagtatgcgcctatcttgagcaaattc
aacccttctctatatcttggtgcgacctcggagcgattcgctgagagcgtcgagagctat
ctcaagttcaatcctcacggcctactcaaatcaaggacgacggagaatgccgttgaactc
agacgccgtcaccccctgctcactaaggatcggttccgtttgctcatgaacgtgcaatac
atgcgcgccctcgtcgatcccggagaagccgtcggtttattggcatctcaaggagtcggc
gagccgtccacccaaatgacgctaaatacgttccacttcgccggccacggagcagccaac
gttacacttggtattccccgcctccgagagatcgtcatgacggcgtccaagcaaccgaag
acaccatccatgatagtgccaatccggccagacgttggggatcgcgaactcgaaaccttc
tgcaagcaggccaaccgtctatcgctatctcaagtcatcgatgaaatcaccgtcacggaa
aagctcgtcacgaatgggaaggctcgacggaaagaattcaatattcgtctggctttcttc
ccccgggaagagtacgagcgtgaataccatgtctcaccaccagagattctagcggcgttc
ggcgctcgctttgctctgatactgaagaaagaaattttgaccgagatgaagcggcttgac
gcagacttgaagggtttgatggcggcgctcggcaaaggaaaagccgtcaaagacaccacc
ggagcggacgctgctgataatgatgacgatgttgatgagggagccaggggaggcaatagg
ggcgaagacgaacgcagtgagattggagacggagacgccgaggatgccaaacatgaacgg
cagaggaaggagcaatcctcttacgaatccgatgggggcgacgacgacctcgatgacgac
gtggactatggggctaaggggatcgcggaagcttatgcgaatgtcgacaaggagatggag
gcagaagagttaacggatgctcagcctgtggtattacaggcgaagaagctcgtgaaccag
tctagcgctgttcaggacgaattcaagcgtactctgaagttcgcaaaatccctgaagttt
gatgacagtggatgttcgctcgaactagagtttgaagaggatatgccgaagcttctactt
gtcggtgttgttgaacgcacgtgtgcaaaaacgattgtacgggaaattccggggataaca
gaatgtttcaaggggacggatgcaaaaaagagagcacaaatcacgactaacggctctaat
ttccgaggagtatgggagttctctgccttgtccgaggtgtcgatcatcgatcatgacgga
atatattcgaatgatatatacggattcttgatgacttacggcgtcgaggctgcccgatct
gccatattaagagaaatatcaggggtcttcgatgcctataagatcgacgtcgatgggcgt
cacctggaattgatcgctgactacatgacgtttgatggcggatataagcctttcaaccgc
aaaggcatatcgacacacagttcgccgctaatgaaggcatcttacgagaccactgctgcc
tttctctcggatgccaccctgtatggagatttcgatactttgacatccccgtcaggcaat
atcgtccttggcaagccgagcacaaccggaacagggtcattcgatgttattatgcctgtc
accgtatcataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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