KEGG   Punctularia strigosozonata: PUNSTDRAFT_93470
Entry
PUNSTDRAFT_93470  CDS       T03131                                 
Name
(RefSeq) NTF2-like protein
  KO
K14284  nuclear RNA export factor
Organism
psq  Punctularia strigosozonata
Pathway
psq03008  Ribosome biogenesis in eukaryotes
psq03013  Nucleocytoplasmic transport
psq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PUNSTDRAFT_93470
   03015 mRNA surveillance pathway
    PUNSTDRAFT_93470
   03008 Ribosome biogenesis in eukaryotes
    PUNSTDRAFT_93470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psq03019]
    PUNSTDRAFT_93470
   03009 Ribosome biogenesis [BR:psq03009]
    PUNSTDRAFT_93470
Messenger RNA biogenesis [BR:psq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PUNSTDRAFT_93470
   mRNA cycle factors
    Stress granule specific factors
     PUNSTDRAFT_93470
Ribosome biogenesis [BR:psq03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    PUNSTDRAFT_93470
SSDB
Motif
Pfam: TAP_C LRR_9 NTF2 LRR_4 UBA_4
Other DBs
NCBI-GeneID: 18886561
NCBI-ProteinID: XP_007388816
JGI: 93470
UniProt: R7S2L6
Position
Unknown
AA seq 464 aa
MAEDELLKQHNLTPPGVPGGSAKEAAVIFKFASQICKPEVQTVSLAHNNLRSGHLISTLA
HYLPKLANLSLEGNNFRVWRDLDYISGRKEKLEHLRELILIGNPLRENEIANGKLNQYRS
SVIRKFPQLEMLDQEPITKISFDNPSTSAVPAPAGPSKPTATTFPYEMGPSLITGVDGII
VSNFLTRFFSFFDTNRPALASVYHPGATFSFSANTSIPPRARIQGFHHSKEMPNQTKLEW
SPWLNGGNGGSRNLSRMGGAVAKTLKSLHVGAEDAVKALIDLPQTVHDVTGAPEKFCVDA
WPVGQGESTTLFVNVHGQLTEQPVGGIRSFDRSFVLAPSPAGSPAKAAGWDVVILSDQLL
VRAYSSHEAWKPGPMRVQAGDPIPPVEELAPIVRLILLAVYERQWLTHVMQPEPQRTMVV
QVSQKTGLNVTYTLDCLQNAGWNVDAAIAKFKEFKVQLPRDAFL
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctgaggacgaactattgaaacaacacaatctcactccgcctggcgtgcccggcggc
tccgcgaaagaagcggctgttatcttcaaatttgcatctcagatatgcaaacccgaggtc
caaacagtgtcactcgcacacaacaaccttcgatcaggacatctgatctctaccctcgcc
cactatcttcccaagctcgccaacttgtctctggaaggcaacaacttccgagtatggaga
gacctcgactacatctccggccgtaaggagaaacttgaacatctccgcgaactcatcctc
atcggcaacccgctacgggagaacgagatcgccaacgggaagttgaaccagtaccgcagt
tctgtgatacgcaagtttccacagctggaaatgctggatcaagaaccgatcacgaagatc
tccttcgacaacccaagtacatcagccgtacccgcacccgcggggccctcaaaaccgact
gcgacgaccttcccatacgaaatggggccgtcactcatcacaggcgtcgacggcatcatc
gtcagcaatttcctcacccgcttcttctccttctttgacaccaaccgccccgcgctcgcc
tccgtctaccaccccggcgccaccttctccttctctgcgaacacgtccatcccgccccgt
gcgcgcatacaaggcttccaccactcgaaggagatgccgaaccaaaccaagctcgagtgg
tcgccgtggctgaacggcggcaacggcggctcgcggaacttgagtaggatgggcggtgcg
gtcgcgaagacgctgaagagcctccacgtcggtgcagaggacgcggtgaaggcgctcatc
gacctgccgcagacggtgcatgacgtgacgggcgcgcccgagaagttttgcgtggatgcg
tggcctgtcggtcagggcgagagcacgacgctgttcgtgaacgtgcacgggcaattgaca
gaacaacccgtgggcggcatacgatcattcgaccgctcgtttgtgctcgcgccgtcaccc
gcagggtcgcccgcgaaagcggcgggatgggacgtcgtcatcctttccgaccagctgctc
gtgcgtgcgtattcgagccatgaggcgtggaagcctggcccgatgcgcgtacaggcaggc
gatccgatacctccagtggaggagctcgcacccatagtacgtctcatcctgctagccgtg
tatgaacgacagtggctgacccatgtcatgcagcccgaaccccagcggacgatggtcgta
caggtctcgcagaagacgggcctgaacgttacgtacaccctcgattgcttgcagaatgcg
gggtggaacgtggatgcggcgatcgccaaatttaaggagttcaaggtgcaactgccgagg
gacgctttcttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system