KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102445026
Entry
102445026         CDS       T02980                                 
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102445026 (DHX16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pss03041]
    102445026 (DHX16)
Spliceosome [BR:pss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102445026 (DHX16)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102445026 (DHX16)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N DEAD Helicase_C AAA_22 AAA_19 AAA_30 Flavi_DEAD nSTAND3 ATPase SecA_DEAD
Other DBs
NCBI-GeneID: 102445026
NCBI-ProteinID: XP_025042148
Position
Unknown
AA seq 992 aa
MTMAEAVGPGGHVARKRGTVAHGGVRSGGRMAALERWVSGELHALLGLSERHVVAFLLGL
ARRSRRVPRSAPQERPARVAEREALALQQKNRSYQLLEDSEEEERDAGGAPGSKHCPEGR
KHKKRRKHLRRKQEEASEEENEAEREPEPAPALEGKDSEDEWDRSERERLQDLEERDAFA
ERVKRKDKERTRNILERSDKKAYEEAQKRLKMAEEDKKTMIPELRKKSRREYLAKREQDK
LEDLEAEILDEEHLFSEQDLTMVERRELEYKRRVRDLAKDYKQAGEQEKLEKSNRYYMPE
ESRSKVPTAWGRRAGGHRAAAILGVRVPAAGLWHWCGGKRADEPPQGLRVRAGGGRDDPI
HQRCADTRHGPGQGGEAGAVMQEVRRSLPVYPFRQDLLVAIAEHQILIIEGETGSGKTTQ
IPQYLYEEGYTEKGMKIGCTQPRRVAAMSVAARVSQEMGVKLGNEVGYSIRFEDCTSERT
LLKYMTDGMLLREFLTEPDLSSYSVVIIDEAHERTLHTDILFGLIKDIARFRPALKVLIA
SATLDTERFSAFFDDAPIFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQPRGDI
LVFLTGQVAMEEKGAPHPSQVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESL
IVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGNVVLLLKS
LGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMIL
ASEQYKCSEQILSIAAMLSVNNSIFYRPKDKVMHADNARMNFFLPGGDHLVLLGAAPQWV
ESAFSMQWCYENFIQFRSMRRARDVREQLEGLLERIEVDLTSSEGDYVPIRKVXXXXXXX
XXXRLTRTGYKTVKHQQTVFVHPNSCLFEEQPRWLIYHELVFTTKEFMRQVIEIDSTWLL
EVAPHYYKAKELEDASAKKLPKKVGKTREELG
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgacgatggcggaagccgttggcccgggcggtcacgtggcccggaagcggggtacggtg
gcccacgggggggtccgaagcgggggcaggatggcggcgctggagcgctgggtgtcgggc
gagctgcacgcgctgctggggctgagcgagcggcacgtggtcgcgttcctgctcggcctg
gcccggcgcagccgccgggtcccacgttcagctccgcaggagcgtccggcccgggtggcc
gagcgggaggccctcgccctgcagcagaagaaccgctcgtaccagctgctggaggacagc
gaggaggaggagagagatgcggggggggccccaggctctaagcactgcccagaggggaga
aaacacaagaagcggcgcaaacacctgcgccggaagcaggaggaggcgtcagaggaggag
aacgaggcagagcgggagccggagccggccccggccctggagggaaaggactcggaggat
gaatgggaccgcagcgagcgggaacgcctgcaggacctggaggagcgcgacgcctttgcc
gaacgggtcaagcgcaaggacaaggagcggaccaggaatatcctggagcggtcggacaag
aaggcctacgaagaggcgcagaagcgactgaagatggcggaagaggacaagaaaaccatg
attccagagctgcggaagaagtcacgccgggagtacctggccaagcgggagcaggacaag
ctggaggacctggaggcggagatcctggacgaagagcatctgttctcggagcaagacctg
accatggttgagcggcgggagctggagtacaagcgccgggtgcgcgacctggccaaggac
tacaagcaggcaggcgagcaggagaagctggagaagagcaatcgttactacatgcccgag
gaaagccgcagcaaggtacccaccgcctgggggcggagggcaggggggcaccgcgcggca
gccatcttgggagtgagagtgcctgctgctgggctgtggcattggtgtggggggaagagg
gctgatgagcccccgcaaggactacgagtacgtgctggaggaggacgagatgatccaatt
catcagcgctgtgcagatacaaggcacggcccaggacaaggaggagaagccggagctgtc
atgcaggaggtgcggcgcagcctgcccgtctaccccttccgccaggacctgctggtggcc
atcgccgagcaccaaatcctcattatcgagggggagacaggctccgggaagaccacgcag
atcccccagtacctgtacgaggagggctacacggagaaggggatgaagatcggctgcacc
cagcccaggcgagtggcggccatgagcgtggcggccagggtctcccaggaaatgggagtt
aagctgggcaacgaggtgggctacagcatccgctttgaggactgcacgtcggagcgcacg
ctgctcaagtacatgacggacggcatgctgctgcgggagttcctgacggagcccgacctc
tccagctacagcgtggtcatcatcgacgaggcccacgagcgcaccctccacaccgacatc
ctgtttgggctgatcaaggacatcgcgcgcttccgcccggcgctcaaggtgctgatcgcc
agcgccaccctggacaccgagcgcttctccgccttcttcgacgacgcgcccatcttccgc
atccccgggcgccgcttccccgtggacatctactacaccaaggcccctgaggctgactac
ctggaggcctgcgtggtgtcagtgctgcagattcacgtcacccagccccgtggcgacatc
ctggtcttcctcaccggccaggtggccatggaggagaagggtgccccccacccctcgcag
gtcgtggtggcgacgaacatcgcggagacgtcgttgaccattgacgggattatctacgtc
atcgacccggggttctgcaagcagaagagctacaacgcccgcaccggcatggagtccctg
attgtcacgccctgctctcgggcctccgccaaccagcgggcagggcgggctgggcgggtg
gcggctggcaagtgcttccgcctctacacagcctgggcctacaagaatgagatggaggag
accacggtgcccgagatccagaggaccaacctgggcaatgtggtgctgctgctcaagagc
ctgggcatcaacgacctcatccacttcgacttcatggacccgccgccccacgagaccctg
gtgctggccctggagcagctgtatgcattgggggcgctgaaccacctaggggaactcacc
aagctggggcggaagatggcagagctgccggtggatcccatgctctccaagatgatcctg
gcctctgagcagtacaagtgctcggagcagatcctctccatcgcggccatgctgtccgtc
aacaactccattttctaccggcccaaggacaaggtgatgcacgcggacaacgcccgcatg
aacttcttcctgcccggcggggaccacctggtgctgctgggggctgccccgcagtgggtg
gagagcgctttctccatgcagtggtgctatgagaacttcatccagttccggtccatgagg
cgggcccgggacgtgcgggagcagctggaggggctgctggagcgcatcgaggtggacctc
acctccagcgagggggactacgttcccatccgcaaggtnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnncgcctgacccgcaccggctacaagacggtcaagcaccagcagacagtcttc
gtccaccccaacagctgcctgttcgaggagcagccccgctggctcatctaccacgagctg
gtcttcaccaccaaggagttcatgagacaggtcatagagatcgacagcacctggctcctg
gaggtggcccctcattactacaaggcgaaggagctggaggacgcctccgccaagaagctg
cccaagaaagtgggcaagacacgggaggagctgggctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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