KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102445339
Entry
102445339         CDS       T02980                                 
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1
  KO
K06225  patched 1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pss00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    102445339 (PTCH1)
SSDB
Motif
Pfam: Patched Sterol-sensing DUF3238
Other DBs
NCBI-GeneID: 102445339
NCBI-ProteinID: XP_006129414
Ensembl: ENSPSIG00000008386
Position
Unknown
AA seq 1503 aa
MKRWSVTSSLRKEAPAAQPASRSPGSPQSSSALRGITEDPARGSPKQQQQQRQQPRPGGG
NMASAVNVSEPESSGGAGGGGCCRDLDRPGRSCSRRRRLTGGNRRAAALDLEYLQRPSYC
DAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGL
RAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALR
QHLDSALQASRVHIYMYNRQWKLEHLCFKSGELITEAGYMDQIIEHLYPCLIITPLDCFW
EGAKLQAGTAYLLGKPPLQWINFDPLAFLEELKKINYQVESWEEMLNKAEVGHGYMDRPC
LNPTDPDCPVTAPNKNSTKPLDVALVLSGGCYGLSKKYMHWQEELIVGGTVKNGTGKLVS
AQALQTMFQLMTPKQMYEHFKGYDYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNST
QKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLL
VALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDR
TGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAIL
SMDLYRREDRRLDIFCCFTSPCTSRVIQIEPQAYADNDNTRYSPPPPYSSHSFAHETQIT
MQSTVQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSD
SNMHCLEPPCTKWTLSSFAENNYDPFLLQIVVIFLFLGLLGVSLYGTTRVRDGLDLTDIV
PRETREYDFIAAQFKYFSFYNMYIVTQRADYPNIQHLLYDLHKSFSNVTYVLLEDNKQLP
KMWLHYFRDWLQGLQDAFDSDWETGKITYNSYKNGSDDAVLAYKLLVQTGNRDKPIDISQ
LTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL
RIPAAEPIEYAQFPFYLNGLRETADFVEAIEKVRAICNNYTSLGVPSYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGRNRLPTPSPEPA
PSIVRFALPPGHTHNGSDSSDSEYSSQTTVSGISDELHQYEATQSSGAPVHQVIVEATEN
PVFARSTVVQPETRCHQPSPKLQSNPEAGSQQSWHHNRQPRRELREGLRPPPYRPRRDAF
EMSTDGHSGPNNRDRAGHRARSHNIRSPAFTAKGASVPAYCQPITTVTASASVTVAVHPA
VHSHNSHGGGFPSYEGYHESDHGPFEDPHVPFNVRCERRNSKVEVIELQDVECEERTNGN
SSD
NT seq 4512 nt   +upstreamnt  +downstreamnt
atgaagaggtggtctgtcaccagcagcctgcggaaagaagcgccagcagcccagccagcc
tcccgttcccctggatcgccccaaagcagcagcgcgctgcggggaatcacagaggaccca
gcccgtgggtcgccaaaacaacagcagcagcagaggcagcagccccgtcccggcggcggc
aacatggcctcggctgttaacgtttcggagccggagagcagcggcggggctggtggcggt
ggctgctgcagagacctcgatcggccggggagaagctgcagcagaaggcggagactgacc
ggagggaacaggcgcgccgcggcgctggatctggagtatctgcagcggccaagctactgc
gatgcagcttttgccttggagcagatttcaaaggggaaggctactgggagaaaagcaccg
ttgtggctaagagcgaagtttcagagactattatttaaactgggctgttacattcaaaaa
aactgcggaaagtttttggttgttggcctcttgatatttggggctttcgctgtaggatta
agggcagctaatctcgaaaccaacgtggaggagctctgggtggaagttggtggacgagtg
agtcgggagttaaattacacacgccagaagatcggagaagaggccatgtttaatccccag
ctcatgattcagacaccacaagaagatggtgctaatgtattaacaacagaagcactcaga
cagcaccttgactctgcacttcaagccagcagggtacacatttatatgtacaacagacaa
tggaaattggaacatttatgttttaaatcaggagaacttatcacagaagcagggtatatg
gaccagattatagaacatctttatccttgtttaatcattacgcctttggactgcttctgg
gagggagcaaagttacaggcagggactgcctatctattagggaagcctcctttgcagtgg
ataaactttgaccccttagcattcttggaagagttaaaaaaaataaactatcaagtagag
agttgggaggagatgctgaataaagcagaggttggtcatggttatatggatcgaccttgc
ctgaatcctactgatcctgattgtccagtcacagcccccaacaaaaattcgaccaaacct
cttgatgtggcccttgttttgagtggtggatgttatggactgtcaaaaaagtacatgcac
tggcaggaagaattgattgtaggtggaacagtcaagaatggtactggaaaacttgtcagt
gctcaggctttacagaccatgtttcagttaatgacccctaagcaaatgtatgaacacttc
aaggggtatgattatgtttcacacatcaactggaatgaagacaaggcagccgcaattctg
gaagcctggcagaggatgtatgttgaggttgttcatcaaagtgttgcacaaaactctact
cagaaagtgctttcctttactaccactactctggatgacattctaaaatcattttctgat
gtcagtgttataagagttgcaagcggctacttattaatgcttgcctatgcctgtttaacc
atgctgcggtgggactgcgccaagtcccagggtgccgtggggctggcaggagtcttgttg
gttgcactctcagtggctgcaggattgggactgtgctcattgattggaatttcctttaat
gctgccacaactcaggttttgccttttcttgctcttggagttggagtagatgatgttttc
cttttggcacatgcatttagtgaaacggggcagaataagagaattccatttgaggataga
acaggtgaatgtttgaaacgaacaggagcaagcgttgcccttacatctatcagcaatgtt
actgctttctttatggctgccttaattcctattcccgctttacgtgcattttctctccaa
gctgctgttgttgtggtattcaactttgccatggttctgctaatttttcctgctatccta
agcatggacctttatcgtcgggaggacaggagattggatatattctgctgttttacaagt
ccatgtactagcagagtgattcagattgagcctcaagcatatgcagataatgataacact
cgctacagccctccaccaccctacagcagtcacagttttgcacatgaaactcagattaca
atgcaatctacagtgcagctgcgcacagaatatgaccctcatacccaggtgtactacacc
acagcagagcctcgctcagaaatatctgtgcagccagtcacagtgacacaggataacctc
agctgccagagcccagaaagcacaagctcaacaagggatttgctttcccagttttcagac
tcaaacatgcattgtcttgagccaccctgtactaaatggacgctctcatcttttgctgaa
aataattatgatccttttctgttgcagattgtggttatttttcttttcctgggtttactt
ggtgtcagtctttatggtactacccgagtgagagatggactggatctcacagacattgta
ccacgagaaacccgagaatatgactttattgctgcacagttcaaatatttctccttctac
aatatgtatatagtgacacagagagcagactaccccaacatccagcacttactttatgac
cttcacaaaagtttcagcaatgtgacatatgttttattggaggacaataaacagcttccc
aaaatgtggttgcattactttcgagactggctgcaaggtctgcaagatgcatttgacagc
gactgggaaactgggaaaatcacatacaacagttacaaaaatggatctgatgatgctgtt
ctggcctacaaacttctggtgcaaacaggcaaccgcgataagcccattgacatcagtcag
ttgactaaacagcgtctggtggatgcagatggaatcattaacccaaatgctttctacatc
tacctgacagcctgggttagcaatgaccctgtggcctatgctgcctctcaggccaacatc
cggcctcaccgtccagaatgggtccatgacaaagcagactatatgccagaaacaaggctg
agaatcccagcagctgagccaattgaatatgctcagtttcctttctacctcaatggattg
cgtgaaactgctgactttgtggaagctattgagaaagtgagagctatctgtaacaactac
accagccttggggtccccagttacccaaatggatacccatttcttttttgggaacagtac
attgggcttcgtcattggcttctcttgtctattagcgtggttctggcttgcacatttctg
gtgtgtgccctctttctcctgaacccctggacggctgggatcattgtggtggtgctggct
ctgatgacagtggagctgtttggcatgatgggtctaattggaataaagctgagtgcagtg
cctgtggtcatcctgattgcttctgttggcataggagtggaattcactgttcatgttgct
ttggcatttttaaccgccataggagacaagaaccgcagggctgtccttgcattggaacac
atgtttgcaccagtactggatggagctgtgtctactctacttggagtcttaatgcttgca
gggtctgaatttgattttatcgtcaggtatttctttgctgttttggcaattttaactatt
ctgggagttctgaatgggttggtgctgcttccagttcttctttcattctttggaccatat
cctgaggtttctccagccaatggtcggaacagattgcctactccatctcctgagccagcc
cctagcatcgtgaggtttgcactgccacccggacacacgcataatggatcagattcatct
gattcagagtacagttctcagaccacagtgtcgggaatcagtgacgaactccatcagtac
gaggccactcagagctctggtgcaccagtccaccaagtaatagtggaagcaactgagaat
cctgtctttgcccgatccactgtggttcagccagagacaagatgtcatcagccaagtcca
aaattacagtctaacccagaagctgggtcccagcaatcatggcatcataacagacaacct
aggcgagaactgagggaaggactacgaccacccccttacaggccgcgcagggacgctttt
gaaatgtctaccgacgggcattctggacctaacaatagggaccgtgcgggccatagggct
cgctctcataatattagaagtccagcattcactgccaagggtgcttctgtgccagcatac
tgccagcctatcactactgtgactgcctcagcttcagttactgttgctgtacaccctgcg
gtgcacagtcataactcacatggaggaggctttccatcttacgaaggataccatgaaagt
gaccatgggccatttgaggacccccatgtgccttttaatgtacggtgtgagagacgaaac
tctaaagtagaagtaatagaactgcaagatgttgaatgtgaagaaaggacaaatggcaac
agctcggattaa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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