KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102447337
Entry
102447337         CDS       T02980                                 
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pss03016]
    102447337 (CDKAL1)
Enzymes [BR:pss01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     102447337 (CDKAL1)
Transfer RNA biogenesis [BR:pss03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    102447337 (CDKAL1)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM
Other DBs
NCBI-GeneID: 102447337
NCBI-ProteinID: XP_006121893
Ensembl: ENSPSIG00000015565
Position
Unknown
AA seq 582 aa
MFLKMPAACDSLLEDIEDIVSAQDVKPHDRQFVRKSVVPKVRKRGSQKHVQEDDDPPSDS
IIPGAQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENAAEADLWLLNSCTVKSPAEDH
FRNSIKKAQEDDKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRL
LGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYSIEEL
VNRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYI
LEHLEEMAKILNHPRVYAFLHIPVQSASDSILMDMKREYCVADFKRVVDFLKEKVPGITI
ATDIICGFPGETDEDFQDTMKLVEEYRFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTK
DLSQLFHSYNPYDHKVGERQSVLVTEESFDSQFYVAHNQFYEQVLVPKDPEFMGKMVEVD
IYEAGKHFMKGRPVSDANVFTPSITKPLEKGEVSGITEEFRYVLENGLNMKACPSAGIRE
KASSSRMVVQLLWQQGGSGLKIMSVSLALLAILVTFFTEVFK
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgttcttgaagatgcctgctgcttgtgattcgctgcttgaagatattgaggatattgtg
tcagcacaagatgtgaaaccacatgaccgacagtttgtacgaaagagcgttgttcctaaa
gtgcgaaaacgcggttcacaaaaacatgtacaggaagatgacgatccaccaagtgatagc
attattcccggtgcacaaaaaatctggatacgcacatgggggtgttctcataataattcg
gatggagaatatatggctggacagttggctgcatatggctacaaaattacagagaatgct
gcagaagcagacttgtggcttttgaacagttgcacggtaaaaagcccagctgaagatcac
ttcagaaactcaattaagaaagcgcaagaagacgacaagaaagtggttttagctggatgt
gttccacaagcccagccacgtcaagattacctcaaaggcttgagcattataggggttcag
caaatagatcgtgtagtagaagttgtagaggaaactattaaaggtcactcggtgagactt
ctgggtcagaaaaaggataatggaaaacggctggggggagctcgattggatttgccaaag
attaggaagaatccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgt
acctactgcaaaaccaagcatgccagaggagacctagcaagttattcaattgaagaacta
gtgaacagagccaaacagtcttttcaagagggtgtttgtgagatatggctgaccagcgaa
gacacaggagcttatggcagagacataggcacagaccttcctacacttctgtggaaactg
gttgaagttattcccgagggagctatgctgagacttggcatgacaaatcctccctatatt
ttagagcatctggaggaaatggcaaagattctcaatcatccaagggtatatgcttttctt
cacataccagtccagtctgcttctgacagcatactcatggacatgaaaagagaatactgt
gttgcagacttcaaacgggtagtggatttccttaaagaaaaagtgcctggaataacaatt
gctacagacatcatctgcggttttccaggagagacagatgaagattttcaagacaccatg
aaacttgtagaagagtacaggtttccaagcctctttattaatcagttttacccacgcccc
gggactcctgctgcaaaaatgcatcaagttccagccgcagtgaaaaagcaaagaacaaag
gatctatcccaactgtttcattcatacaatccttatgatcataaggttggtgagagacaa
agtgttctggtaacagaagaatcttttgattcccagttttatgttgctcataatcaattc
tacgagcaggttctcgtgccaaaggaccctgaattcatgggtaaaatggtagaagtggac
atttacgaagcaggaaaacattttatgaaggggcggccagtgtcagatgccaatgtgttc
actccatccatcaccaaaccattagaaaaaggagaggtttctggtataacagaggagttc
agatatgtgctggaaaatggcttgaatatgaaagcatgcccttctgctgggatccgagaa
aaagcatcgagttccaggatggtggtgcaacttctttggcagcaaggaggaagtggactg
aagatcatgtctgtcagcctggctttactggcaattcttgttactttttttacagaggtg
tttaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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