KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102448006
Entry
102448006         CDS       T02980                                 
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
  KO
K16630  collagen type XXII alpha
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 102448006
NCBI-ProteinID: XP_025040661
Ensembl: ENSPSIG00000004222
Position
Unknown
AA seq 1592 aa
MPYMLILLALLLSGEKIEAQRAGCKNVHYDLVFILDTSSSVGKEDFEKVRQWVSNLVDTF
EIGPDKTRVGVVRYSDRPTTEFDLGRYQTREEIKEAARNIKYYGGNTNTGDALRYINTYS
FSKEAGGRLSDPTIKKVAILLTDGRSQDYVMDAATAARKAGIRIFAVGVGEALKEELDEI
ASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTNGETDEIPGFDL
VDLFSVMEIFGRKENGIRSSYVRLGSFPIVQKTEGVFPQGLPDEYAFVATFKFRKASRRE
DWYIWQIIDKYGIPQVSIRLDGENKAVEYSSIGLTKDAVRVVFRSARVSDLFDRNWHKIA
LSIQSKSVSLYIDCKLVQTLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQRMVIYCDSR
HAELETCCDIPSGPCQVTVVTEPPPPEIRPTVGSEQVGAQNTLNCSCPAGEKGERGPTGP
EGFRGQKGESGNPGLPGLKGEKGDSGRGAYGRGEKGEQGSPGSPGPPGRDGAKGETGEPG
QPGAFGLPGPVGPKGSEGQRGPPGIKGYVGAPGLQGERGEKGTRGDKGERGLDGFPGKPG
VEGKQGLKGSTGPPGANGPQGEKGEAGLPGLPGSAVQMEGLKGEQGAPGPRGPPGVPGTP
GPAGLEGKAGVPGLQGQRGKKGEPGFPGLDGLPGPRGLAGSPGVAGPPGPPGAPGLPGEI
GVSGKTGPPGPAGLPGKDGLNGLPGLLGQKGEQGERGQDGFPGQAGPKGDAGDHGLAGEK
GETGLPGPPGLLGKKGEKGDLGEKGRDGLPGFKGERGEKGDVGPAGPPGLPGTTTLFTPR
PQIPGETGPKGEKGDRGGRGEPGPHGVPGEMGLPGPPGPQGAKGQEGARGEPGDTGPPGP
AGPPGLQGLSGNVGLPGDAGQPGKDGQKGEKGDPGKEGKPGLPGLSGEPGPAGIPGLPGK
GKDGERGERGSPGLPGLLGHKGDRGAPGLPGQPGDRGAPGVGEAGLPGPAGPAGDKGPSG
PRGLPGVPGPQGPTGQDGLPGNPGERGPPGKPGASSLLSPEDINLLVKDVCNDCPPGPPG
LPGMPGFKGDRGAQGPPGRDGLNGKMGDPGPRGLPGPPGVDGPKGTKGDRGTSGDAGEKG
GQGHPGMPGFSGPPGNPGPPGPDGKPGPARTILASLKSCLNNNPSVATLQGKDGPPGPPG
PPGLPGLQGADGKDGKPGSPGELGKPGEPGLPGQEGARGLPGFKGPRGDAGPPGPRGEPG
GTGPAGREGPPGKDGDMGPIGPQGPRGLRGQPGKNGSPGAPGEAGPAGNPGPKGNKGENG
SPGLPGFIGPRGPPGDTGEKGPSGKEGAAGKPGNHGPKGDRGDPGVKGDKGPQGEKGLPG
DPGIPGHKGHTGLMGPQGPPGDSGQAGPPGPPGQPGFPGPRGDSPSLETLRRLIQEELGK
QLDAKLAYLMAQMQPAHIKAPQGRPGPPGPPGKEGLPGRPGPSGEPGRPGQTGSEGPPGP
VGPKGERGVKGERGDTGVGQRGEIGPPGIPGLPGEPGYGKDGMPGAPGPQGEAGVPGLMG
PQGPPGANGQCDPSQCAYYASLAARPGNVKGP
NT seq 4779 nt   +upstreamnt  +downstreamnt
atgccttacatgctgattcttcttgcactcctcctaagcggagagaaaattgaggcacag
agagcaggttgcaagaatgtccactatgaccttgtcttcatcttggatacctcttccagt
gtgggtaaagaagattttgagaaggtccgccagtgggtatctaatctggtcgataccttt
gagattggaccggacaagacccgtgtaggagtggtacgttacagcgacaggccaaccacg
gagtttgacttgggaaggtaccaaactcgtgaggaaatcaaagaagcggcaaggaacatt
aagtattatggaggcaatacaaacactggggatgcccttaggtacatcaacacctatagc
ttttccaaagaggctggtgggaggcttagtgatccaaccattaagaaagtggctatactt
ttgactgatggaagaagtcaggattatgtcatggatgcagccactgcagcccgtaaggca
ggaatcaggatctttgctgtgggagttggtgaggccttaaaggaggaactggatgaaatt
gcttctgagcctaaatctgcccatgtgttccatgtctccgattacaatgccattgataaa
atacgagggaaactgagacgacggctttgtgaaaatgtgctgtgtccaaatgtccatgta
gaaggagatcgatttaaacacaccaatggagagactgatgaaatcccagggtttgacctg
gtggatttgttcagtgtgatggagatttttggaaggaaagaaaatggaattcggagttct
tatgtgcgacttggaagcttccccatcgtgcagaaaactgagggtgtattcccacagggc
ctgcctgatgaatatgcctttgtagccaccttcaaatttcggaaggcttctaggagagaa
gactggtatatttggcagattattgacaagtacggcataccacaggtctctatccgattg
gatggggagaacaaagccgtggagtacagttccattgggctgaccaaggacgccgtgcga
gtggtctttcgaagtgcacgagtcagcgatttgtttgaccgcaactggcataagatcgcc
ctcagcattcagtccaagagcgtctccctctacattgactgcaaactcgtgcagacattg
cctattgaagacagagaaaatattgacatccaagggaagactgtgattggcaaacgcctg
tatgacagcgtgcccatagattttgatcttcagcggatggtgatttattgtgattcccga
catgctgagctggaaacctgctgtgatattccctctggaccatgtcaggtgacagtcgtc
actgaaccaccacctcctgaaataagacccactgttggcagcgaacaagtgggtgctcaa
aataccctcaactgttcctgtcctgctggagaaaagggtgagaggggtccaacaggccct
gaaggtttcagaggtcaaaagggagaaagtggcaacccaggacttcctggtctaaaagga
gaaaaaggagactcaggcagaggagcatatggcagaggagagaagggagaacagggatcc
ccaggctcgcccggcccccccgggagggatggagcgaaaggagaaactggggaaccagga
cagccaggggcctttggacttcctggtccagtgggccctaagggatctgagggacaacga
ggtccaccaggaattaaaggctacgttggagcacccggcctgcagggagaaagaggagaa
aagggaactcgaggagacaagggagaacgaggccttgatggattcccagggaagccaggt
gtagaggggaaacagggccttaagggtagcacgggccctccaggtgccaacggaccccaa
ggagaaaagggtgaagcgggtctcccaggactgccgggctctgcagtacaaatggaaggt
ctgaaaggagagcaaggggcgccaggcccacgaggccctcctggagttccagggacgccg
ggtccagctggtctggaaggcaaggcaggagttcctggtttacaaggtcaaaggggcaag
aagggtgaacctggcttcccaggactcgatggcttgcctggacctcggggtcttgccggg
tctcctggtgtcgctggccctcccggacctccaggtgctccaggattacctggagaaatt
ggtgtttctggtaaaactggaccaccaggaccagcgggattgcctggcaaggatggatta
aatggtcttcctgggcttctgggccaaaagggagaacaaggagagaggggacaggacggt
tttcctgggcaagctggtcccaagggcgatgcaggagatcacggtctagctggtgagaag
ggtgaaacaggccttcctggtcctccagggttacttgggaagaagggagagaagggagat
ctgggtgaaaaaggaagagatggactccctggattcaaaggtgaaagaggtgaaaagggc
gacgtgggccctgctggtcccccaggtttacccggaacaacaaccttgtttactccacgc
cctcagattcctggagaaactgggccgaaaggagagaaaggagatcgaggaggcagaggg
gaacctgggccgcatggtgtccctggtgagatggggctgccaggacctccaggaccacag
ggcgccaagggacaggaaggagccagaggagagccaggagatactggtcctcctggtcct
gctggacccccaggtctccaaggcttgtcaggaaacgtgggtcttcctggagatgctggc
caacctgggaaagatggacaaaagggtgaaaagggtgacccaggaaaggaaggaaaacca
ggactacctgggctgtcaggtgagcctggccctgctggaatacctggcttacccgggaag
ggtaaagacggagaacggggtgaaagaggctccccaggcttaccaggactcctcggacac
aagggagatagaggggctcctggtcttcctggacagccgggagacagaggtgcaccagga
gttggagaagctgggcttcctggccctgcgggaccagcaggagacaaagggccatcgggc
cctcgaggtttaccgggtgttccaggcccgcaggggccaactgggcaggatggtttacct
ggaaatcctggggaaagaggacctcctggaaagccaggtgcctcctccctgctttctcct
gaggacataaatctcctagtcaaggatgtgtgcaacgactgcccgcctggcccgccgggg
ctccctggaatgccaggcttcaagggtgacagaggtgcccaaggacctccgggtagagat
gggctgaatgggaaaatgggcgatcctggaccccggggtctcccaggccctccaggggtg
gatggtccaaagggcactaaaggagaccgtgggacatctggggatgctggtgaaaaaggt
ggacagggtcaccctgggatgcctggattctcgggacctcctggaaacccagggccccct
ggaccagatggcaaaccaggacctgcacgaacaatattagcttctttaaaatcttgtctg
aacaataacccatctgtggccactttacagggtaaagatggcccacctggtcccccaggc
ccaccaggactgcctggccttcagggcgctgacggcaaggatggcaagcctggatctccc
ggggaactaggcaaaccaggagaacctggactccccggccaagagggggccagagggtta
ccgggtttcaaggggcccagaggagatgcaggtcccccaggacccaggggagagccaggc
gggaccgggccggccggtcgtgagggcccaccggggaaggatggcgatatgggccccatt
ggacctcaaggtcctcgaggactcagagggcagccaggcaagaatggctcacccggtgcc
ccaggggaagctggtcctgcaggtaacccaggcccaaaaggaaacaaaggagaaaatggc
agtcctggacttcctggatttattgggcctcgaggccctccgggagacacaggagagaag
gggccttccggaaaagagggcgccgccgggaaaccaggcaaccatggacccaaaggagac
aggggagatcctggcgtcaaaggtgacaagggcccacagggagagaaaggcctgcctggg
gatcctggcatacctggccataaaggccacactggattgatgggtccccagggacctcca
ggcgacagtggacaagctggcccaccaggacctccaggacagccaggcttccccggaccc
aggggggactctccctcactggagactctgagaaggctcatccaagaagagttaggaaag
cagctagatgccaaactagcctacctcatggctcagatgcagccagcacatattaaagca
ccacaaggcagaccagggcctccggggcctcctggcaaggaaggactcccaggaagacca
ggcccatcaggagaaccaggccggcctggacagacagggtctgaaggaccccccggccca
gtgggtccaaaaggggaaagaggtgtgaagggtgagagaggagacaccggcgttggtcag
aggggtgaaattggtcctccaggaattccaggccttccaggagaacctggctatggtaaa
gatgggatgccaggtgcacctggtccacaaggagaagcaggggtgccaggcctcatgggc
ccacagggacctccgggagccaatggacagtgcgatccttctcagtgtgcttactatgca
agtctggccgcccggcctggcaatgtcaaagggccctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (85)   

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