KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102450221
Entry
102450221         CDS       T02980                                 
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pss03400]
    102450221 (APLF)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102450221 (APLF)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102450221 (APLF)
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA DUF5117 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 102450221
NCBI-ProteinID: XP_006114170
Ensembl: ENSPSIG00000011567
UniProt: K7FXU4
Position
Unknown
AA seq 548 aa
MPGFELAPADGGCPLALPPGQTVLGRGPLLGITDKRVSRKHAILEVVGDQLRIKPIHVNP
CFYQSPENNCLLPLETDEWHSLSPGDSFSLLIDKYTFKIISTHSDVENTLRKNRKIVDET
ANKSASVSHLTKMSCDPSSVQSTSCSNNNVKVHSLLERTAETPKKTSSKSSLFSANYNES
EEREPEWRKRILPSWMLQGELMVKSLSTPVTNKGGGVTKGRGRGISSMKPSKSRADMHGR
KRLASEECLGDFKEMEQDQVKKSKTTEEETTVPEARDASGIPLTTAMREVEENENKSASQ
GIESSVEKRDCPLHSKRLDSEHRLDSENKLSTEVKEVDEKDKKDEMIHSASQQTHQDKTS
HSNISFAETQKRDLNQDPKADDFNSARSTDALQSSKYVKQKRTPCMYGTGCYRKNPVHFQ
EFSHPGDSDYQNMEVVSQDDDDRPECPYGTTCYRKNPQHKLEYKHTATPETEARTTRQKT
TKRGKSILEEDSDNDGEPNEYDLNDSFLDDEEKEEEYDPTDEDSDWEPNPEDVETLLKEA
QKFIKTKK
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgccgggcttcgagctcgcgcccgcggacgggggctgcccgctggcgctgccgcccggc
cagaccgtgctgggaagaggccccctgttgggaattaccgataagagagtatccagaaaa
catgccatattggaagtggtgggtgaccagcttcgcatcaaaccgattcacgtaaatcct
tgtttttatcaatcacctgagaacaactgtctattaccattggaaacagatgaatggcat
tctttgagcccaggtgacagcttttcccttttaatagataagtacactttcaagatcatc
tctactcactcagatgtggaaaacacattaaggaaaaataggaaaattgtagatgaaaca
gcaaataaatccgcttcagtgagccaccttaccaagatgtcttgtgatccatcttcagta
caatcaacatcatgttccaataataatgtgaaagtgcattctcttttggaaaggacagca
gaaactccaaaaaagacctcatccaaaagttcgcttttttctgctaattataatgaaagt
gaggagagagagcctgaatggaggaaaaggatacttccatcttggatgttgcaaggagaa
ctcatggtaaaaagtctttcaactccagtcactaataaaggtggtggagtaacaaaaggc
agagggagaggaataagcagtatgaaaccatcaaagtcgagagcagatatgcatgggaga
aaacggttagcttctgaagagtgtttaggggatttcaaagagatggaacaagatcaggta
aagaagagcaaaactactgaagaggaaaccactgtccccgaagcaagggatgcatctgga
atacctcttaccacggctatgagggaagtggaagagaatgaaaacaaatcagcatcacaa
gggattgagagttctgtggagaaaagagattgtccgctccacagcaagaggttagattca
gaacacaggctagattcagaaaacaagctctctactgaagtaaaggaagtagatgaaaag
gataagaaagatgagatgatccattcagcaagccaacagactcaccaggacaagacatcc
cactctaatatttcctttgctgagactcaaaagcgtgatttaaatcaggatcctaaagct
gacgattttaactcagccagaagcacagatgctctacagagttctaaatacgtgaagcag
aagaggacaccctgtatgtatgggacaggttgttacaggaagaatccagttcattttcag
gagttcagtcaccctggtgacagcgattatcagaatatggaggttgtaagccaagatgat
gatgacagacctgaatgtccatatggaactacttgttataggaagaatccacagcacaag
cttgaatacaaacacactgcaacgccagaaacggaagcaagaaccaccagacagaaaact
actaaaagaggaaaaagtattttggaggaggacagtgataatgatggcgaaccaaatgaa
tatgacctgaatgacagctttctagatgacgaggagaaagaggaggagtacgaccctacg
gatgaagattctgattgggagccaaatcctgaagatgttgaaacactgttgaaagaagcc
caaaaatttattaaaactaaaaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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