KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102450880
Entry
102450880         CDS       T02980                                 
Symbol
RNF168
Name
(RefSeq) E3 ubiquitin-protein ligase RNF168
  KO
K20779  E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:pss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102450880 (RNF168)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102450880 (RNF168)
Enzymes [BR:pss01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     102450880 (RNF168)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    102450880 (RNF168)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     102450880 (RNF168)
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 Prok-RING_4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-RING_5 U-box USP8_interact
Other DBs
NCBI-GeneID: 102450880
NCBI-ProteinID: XP_014429961
Ensembl: ENSPSIG00000015970
UniProt: K7GCE0
Position
Unknown
AA seq 616 aa
MSKKAEAPLSLTDCLCQICMEIFVEPVTLPCNHTLCNSCFQSTVEKASLYCPFCRRRVSS
WARYNARKNTLINWELWERIQKNYPEECQCRVNGQDLEEDLCISQPLHQLSKPGELRQEY
EAEISKVEAERRAHEQEESKVSEEYIQRLLAEEEEEHRLAEERQRELEEQLKQDEVMAWE
LSLRLNKSTDEHMFSTPLRANRHASSPSPINSCKTKSKSSNSGDIQKYLSPKPSRVLVPQ
SLSKKAEKDRNSSCSMENNSTEEDILMWQKKDSEEMPTLSPQTTCTVQDRSVNDSFLESC
LTYLNTSPPVTSPRTNWEGLPGSNYQVDKITNALHNITKQGRADPGLPCSSGDVARSALD
NDNSTCTANRDSEKCAEGSSSLWEAAVSAVSGKLENRDAAPNFMEVAANCSVEGREQNVL
QSNKEAPKRKSQEPPTEAAIDSCLMDKRRKTSPETYEDQEEKVNDLNMQVHIDLEKQLYE
RLKQEEQDRLLALQLQREIDKEQKMLNRKKGSPDEYLLRPKSSPSPEESPTAKGSHKMAS
DSTSPKNQSEMSRRKLRRSSHNENRQPSSKLQMKSPSVRGKVLNCVNSCDSKDIQSLLTK
NKQNTILQMFKRPVSK
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtcgaagaaagctgaggctccgctttccttaactgactgtctttgccaaatctgcatg
gaaatttttgtggagccagtgaccctgccatgcaaccacactctctgtaattcttgtttc
caatcaacagtggagaaggcaagtctgtactgccctttttgccgccggcgggtctcttct
tgggcacgatataatgcccgcaaaaatactcttatcaattgggaactgtgggaaaggatt
caaaagaattacccagaagaatgccaatgcagagttaatggacaggatctggaagaggac
ctttgtatatcccaaccactgcatcagctaagcaagcctggggaattgagacaggaatat
gaggcagagattagcaaggtggaggcagagaggcgggcacatgaacaagaggagagcaaa
gtaagtgaggagtacattcaaagactattagcagaagaggaagaagaacacaggcttgca
gaagaaaggcaaagagagttggaggaacagcttaaacaagatgaagtgatggcgtgggag
ctctctctcaggctgaacaagtctaccgatgaacacatgttcagcactcctttacgtgca
aacagacacgcgtctagcccatctccaattaattcatgcaagacaaagagcaaatcaagc
aactctggagacatccagaagtatctatctccaaagccatctcgtgtcttggtaccacag
tcgctctctaaaaaagcagagaaagacaggaatagctcctgttctatggaaaataatagc
actgaagaggatatcttaatgtggcaaaaaaaggatagcgaggaaatgccaactctatct
ccacaaaccacctgcactgttcaagatagaagtgtgaatgattcgtttttagaatcatgt
ctgacttatttaaatacctctcctccagtgacgtctcctcgcactaattgggaaggtctt
ccaggatcaaattatcaggtagataaaattacaaatgcacttcacaatatcacaaagcag
ggaagggctgatcctggacttccttgttccagtggagatgtagccagaagtgccttggac
aatgacaactctacatgtacagcaaacagagattctgaaaagtgtgcagaagggagctct
tctctttgggaagcagctgtttctgcagtgtctggcaaattagagaacagagatgcagcc
cctaatttcatggaagtggctgcaaactgctcagttgaaggaagggaacaaaatgtgtta
cagagcaataaggaggctccaaaaaggaagtctcaggaacctccaactgaagcagcaatt
gattcatgcttgatggataaaaggagaaaaacttctccagaaacttatgaagaccaagag
gagaaggtaaatgatcttaatatgcaagtacacatagatttggagaagcagctttatgag
aggcttaagcaagaggagcaagacaggctcctggctctgcaacttcagagagagatagac
aaggagcaaaagatgttaaaccgaaagaaaggttctccagatgagtaccttctgcgccct
aaatcatctccgtctccagaggaatctcccactgcgaaaggcagtcataagatggcaagt
gattctacatctcccaagaaccagagtgaaatgagtcgtaggaaactgcgaagaagctcc
cataacgagaacaggcagccttccagcaagctccaaatgaaatcacccagtgtcagagga
aaggtgttgaactgtgtcaacagctgtgactccaaggatatccaatcgctgttgaccaag
aataagcaaaatacaatccttcagatgttcaaacggcctgtttcaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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