KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102459957
Entry
102459957         CDS       T02980                                 
Symbol
COL9A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510  Focal adhesion
pss04512  ECM-receptor interaction
pss04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pss00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102459957 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102459957 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102459957 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pss00535]
    102459957 (COL9A2)
Proteoglycans [BR:pss00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102459957 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102459957
NCBI-ProteinID: XP_025041849
Ensembl: ENSPSIG00000013876
Position
Unknown
AA seq 645 aa
MANSFRSLQLCLLLQAICLCLAQLQGPPGEPGPRGPPGPPGVPGSDGIDGDKGPPGAAGT
PGSKGEPGVPGPDGPVGKPGIDGLTGAKGEPGPHGRPGPKGQPGLPGPPGLPGPGLSGPP
GPPGQVGLPGEIGVLGRKGEAGPDGPRGPPGPPGKPGPPGHIQGLEGSADFLCPTNCPPG
PKGPQGLQGIKGHRGRSGALGEPGRQGRPGSMGDMGISGEQGIPGPPGPQGLRGYPGMAG
PKGETGLRGYKGMAGSIGAAGRPGEEGPKGPPGGAGEKGDMGARGFRGPQGAMGPKGDNG
APGIDGKDGTPGTPGVKGSAGQSGRPGSPGHRGLAGLPGQPGAKGGPGVKGEPGARGLPG
LTGAPGKIGELGSPGEPGPQGVPGLKGDRGERGPVGPQGLQGKVGSKGEQGPPGIPGPQG
LPGVKGDKGSPGKIGAKGDIGDPGVEGLAGEKGEKGESGEPGPKGQQGVRGEPGFTGPTG
DSGSPGVRGYPGPPGPRGLLGERGVPGMPGQQGVVGRDAGDQHIVDVVLKMMQEQLAXVG
GAGVMGPPGPPGPPGAPGEQGPHGHAGPRGIPGILGAPGQIGNTGLKGKRGEKGERGEVG
RGHQGMPGPPGIPGRLIAEIRQLYPLVWGQKLKSTEATPADGKKQ
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggctaactccttccgcagcctacaactctgccttctcctccaagccatctgcctgtgt
ctggctcagcttcaaggtcctccaggagagcccgggccccgagggcccccaggtccgcca
ggagtgccaggatccgacggcatcgatggtgacaaaggcccgccaggcgctgctgggacc
ccgggctccaaaggggaaccaggcgttccaggtccagatgggcccgtggggaagccaggc
atcgatggcctgaccggagcaaagggggaaccagggccacacgggaggccagggcctaag
ggccagcccggactgccagggccaccgggacttcccggccctggattgtcaggacctcct
gggcctccgggccaggttggacttcctggggaaatcggagtgttgggccgtaagggcgaa
gcaggccctgatggaccacgaggcccccccggacccccggggaaacctggtcctccaggg
cacatccaagggctggaaggcagtgcggatttcctgtgtcccaccaactgcccaccaggg
cccaagggcccccagggactgcagggaatcaagggacacagaggccgctccggtgccctc
ggggaaccaggaagacagggcaggccgggctccatgggcgacatgggcatttccggagaa
caaggcatccccgggcctccaggtcctcagggcctgaggggttaccctggcatggcggga
ccaaagggcgagacgggtctccgtggctacaaaggaatggctgggtctatcggagctgct
ggcaggccgggagaagaaggccccaaggggccacctggtggagccggggagaagggagac
atgggtgctcgcggcttccgaggtccccagggagccatgggccctaaaggagacaatgga
gccccgggcatcgatggtaaagacggcacccccggcacccccggcgtgaaggggagcgca
gggcagtccggccgtcccgggtcaccaggccaccgaggattagctggtttgcccggccaa
cctggggccaaaggcggcccaggcgtcaagggtgaaccaggggcccgtggcctgccagga
ctcaccggagccccggggaaaattggtgaacttggatcgccgggtgagccagggccacaa
ggtgtccccgggctgaagggcgatcgcggagagcggggcccggtgggtccccagggcctg
caggggaaagtgggctcgaaaggcgagcaaggtcctccagggatccccgggccacagggc
ctgcccggtgtcaaaggagacaagggctccccagggaaaattggagccaaaggggacatt
ggagaccctggcgtggaaggccttgccggggagaaaggcgagaagggggagtccggtgag
ccaggaccaaagggtcagcaaggcgtccgtggcgagccgggctttaccggccccactggg
gactcagggtcccctggtgtgagaggttacccaggaccccctggccctcgagggctcctc
ggcgagcgtggtgtgccgggaatgcccgggcagcagggcgtggtgggccgggatgctggg
gaccagcatattgtggacgtggtcctgaagatgatgcaagagcagctggcgnnggtgggt
ggagccggcgtgatggggccgcctggacccccagggcctcctggagcccctggagagcaa
ggcccacacgggcacgccggaccccgcggcatcccagggatcctaggagccccggggcag
atcggcaataccggactcaaagggaagcgaggggagaaaggagaacgtggcgaggttggg
cgtggacatcagggtatgccaggaccaccaggcatcccaggtaggctcattgctgaaatc
cgacagctgtatcccctggtttggggacagaagcttaagagtacggaggctactcctgca
gatgggaaaaagcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

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