KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102461916
Entry
102461916         CDS       T02980                                 
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03022  Basal transcription factors
pss03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102461916 (GTF2H1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102461916 (GTF2H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pss03021]
    102461916 (GTF2H1)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102461916 (GTF2H1)
Transcription machinery [BR:pss03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102461916 (GTF2H1)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102461916 (GTF2H1)
SSDB
Motif
Pfam: PH_TFIIH BSD
Other DBs
NCBI-GeneID: 102461916
NCBI-ProteinID: XP_025045624
Ensembl: ENSPSIG00000002597
Position
Unknown
AA seq 548 aa
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHLYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNTVDSSTAPNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKVKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLTALEDKSLDEGYGVSSVPSTSNSSKSFKESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHSSETSSMDGNSRDSDFFQPPIKKVKLQEAIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIISSFHSIRQEMDAYVPRLTQ
VLSSGAATSIITALSPGGALMQGGTQQAINQMVPNDVQSELKHMYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcaacatcatctgaggaagtgttactgatagtaaagaaagtgcgtcaaaagaaacag
gatggggctctctaccttatggctgaaaggatagcctgggcacctgaaggcaaagaccga
tttacagtcagccatttgtatgcagatataaaatgccagaaaatcagtcctgaaggaaag
gctaaaattcagttacagctggtactgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcactgcagtgaaagagcgagatgcagtgaaggaccttcttcagcagctgtta
cccaaattcaagaggaaagcaaataaagaacttgaggaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagacctcgttgtgagccaagtaattagtgctgaa
gaattctgggccaaccgtttaagcatgaatactgtggatagttctacagcgcctaataag
caggatgtgggcatctctgcagcttttctggctgatgttcggcctcaaacagatggctgc
aatggtctgaggtataacttaacttcagatattattgaatccatattcaggacatatcct
gcagtaaaagtgaaatatgcagaaaacgttccacataatatgacagaaaaagaattctgg
acacggtttttccagtctcactacttccatcgagataggctgaatacaggttcaaaagac
ctcttcgctgaatgtgccaaaatggatgaaaaggggttaaaaacaatggtgtctcaaggg
gtgaaaaatcctcttctggatttaacggccttggaggataaatcattagatgagggttat
ggtgtttcctctgtgccgtccacatcaaactcctcaaagtccttcaaggagagtagcaat
gctgccattataaaacgctttaatcatcacagtgccatggtccttgcagctgggctcaga
aaacaagaagcacaaaatgatcactccagtgagaccagcagtatggatggaaattccagg
gattcagatttctttcagccaccaataaaaaaggtgaagctacaggaggctattgaatat
gaagatttaggaaagaataatagcattaaaactattgcactaaatctaaagaaatctgat
cggtattatcatggtccaactccaattcagtcacagcaatatgcaaccagtcaggatatt
attagctcttttcatagtattagacaagaaatggatgcctatgtacccagattaactcag
gttctttcaagtggtgctgctactagcatcatcacagccctgtcaccaggaggagcactt
atgcagggtgggacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacatgtatgtggcagttggggagctactgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaagttgtgaaaatgaagagtaacttggaaagattt
caggttacaaaactctgtccattccaagaaaaaattcggagacagtatttaagcacaaat
ttgataaatcatatagaagagatgctgcagacggcctacaataaattccacacatggcag
tcccgacgtatgctcaagaaaacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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