KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_0087
Entry
PSPTO_0087        CDS       T00118                                 
Name
(GenBank) bacterial extracellular solute-binding protein, family 5
  KO
K12368  dipeptide transport system substrate-binding protein
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02010  ABC transporters
pst02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PSPTO_0087
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    PSPTO_0087
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pst02000]
    PSPTO_0087
Transporters [BR:pst02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Dipeptide transporter
    PSPTO_0087
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AAO53641
UniProt: Q88BD0
Position
complement(108910..110496)
AA seq 528 aa
MRLAALPFLLASTLLPLTAQASSLAVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVDF
DAKSGKLVPSLAQSWTVSADGLTYDFKLRTGVKFHTTDYFTPTRELSADDVLFSFQRMLD
PQNPWHKIAQSGFPHAQSMQLPALIKSIEAPDAHSVRFTLNRADSTFLATLSMGFASIYS
AEYTAQLLKAGTPEKLNSQPIGTGPFVFKRFQKDAVVRYEAFKDYFAGKSDIDTLVYAIT
PDANVRLQKIRQDECQIALSPKPLDIQAASKDDSLKVEKTDAFMTAFVAINSQHPPFDKP
EVRQAINLAFDKANYLKAVFEGTAGAANGPYPPNTWSYAKDLPGYPHDVAKAKALLAKAG
LKDGFKTTVWTRPSGSLLNPNPSLSAQLLQADLKQIGIDAEIKVIEWGELIRRAKAGEHD
LLFMGWAGDNGDPDNFLTPQFSCAAVQSGTNFARYCDKTLDKLIADGKSTSDQAERSKLY
HQAQQQIQQQALWIPLAHPTAAALVRKDVSGYQVSPFGRQDFYKVQVK
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgcgccttgctgcacttccctttttgcttgcctccacgctactcccgcttaccgcacag
gcgtcgagccttgcggtctgcactgaagccagccccgagggtttcgatgtggtgcagtat
aactcgctgaccaccaccaacgcgtcggctgatgtgctgatgaaccgtctggtggacttc
gatgccaagagcggcaagctggtgccgagcctggcgcaaagctggaccgtctccgccgac
ggcctgacctatgatttcaagctgcgcaccggggtgaaattccacaccaccgactacttc
acgccgacccgcgaattgagcgcggatgacgtgctgttcagcttccagcgcatgctcgac
ccgcagaatccgtggcacaagattgcccagagcggcttcccgcatgcgcagtccatgcag
ttgcctgcgctgatcaaaagcatcgaagcgcctgacgctcattcggtccgcttcacgctc
aatcgagccgattcgactttccttgccacgctgagcatgggttttgcgtcgatctactcg
gcggagtacaccgcgcagctcctgaaagcgggcacgccggaaaaactcaacagccagcca
atcggcaccgggccgtttgtcttcaagcgcttccagaaagatgccgtggtgcgttacgaa
gcgttcaaggattacttcgccggcaagtcggatatcgacacgctggtgtatgccattacg
ccggacgccaatgtgcgcctgcagaaaattcgtcaggacgagtgccagatcgccctgtct
cccaagccgctggatattcaggcagccagcaaggacgactcgctgaaggtcgaaaaaacc
gacgcgttcatgactgcatttgttgcgatcaacagccagcacccgccgttcgacaagccc
gaagttcgtcaggcaatcaacctggctttcgacaaggccaattacctgaaagctgtattt
gaaggcaccgccggcgctgccaatggcccttatccgcccaatacctggagctacgccaaa
gacctgcctggctatccgcacgatgttgccaaagccaaggcattgctggccaaggccggt
ttgaaagacggcttcaagaccactgtctggacacggccttccggcagcctgttgaacccc
aaccccagtctgagcgcgcaattgctccaggctgatctgaagcagatcggtatcgacgcc
gagatcaaggtgatcgagtggggcgagctgattcggcgcgccaaggccggtgagcatgat
ctgctgttcatgggctgggcgggcgataatggcgatccggataacttcctgacgcctcag
ttctcgtgcgctgcggtgcaatcggggaccaactttgcgcgttattgcgacaagaccctg
gacaagctgatcgctgacggcaaatccaccagcgatcaggccgagcgcagcaagctgtat
caccaggctcagcagcagatccagcaacaggcgctgtggatccccctcgcccacccgaca
gccgctgcactggtgcgcaaggacgtttcgggctatcaggtcagccccttcggacggcag
gacttttacaaggtgcaggtgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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