KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_0487
Entry
PSPTO_0487        CDS       T00118                                 
Name
(GenBank) ABC transporter, permease protein
  KO
K02053  putative spermidine/putrescine transport system permease protein
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pst00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSPTO_0487
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pst02000]
    PSPTO_0487
Transporters [BR:pst02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    PSPTO_0487
SSDB
Motif
Pfam: BPD_transp_1 BIV_Env
Other DBs
NCBI-ProteinID: AAO54031
UniProt: Q88AA5
Position
533568..534437
AA seq 289 aa
MPASPEHALALRKDGFFRLRLRPTAAVALAPAMAVLLAFWLLPLTHLILLGAQGTDGNGS
GYWQVLSSAQYLGSLAQTCLLALVVTLVALLIGGISGVFLARNHFFGRSALVALLTFPLA
FPGVVVGFLVILLAGRQGIFAALGLQLAGERWVFAYSLIGLFIGYLYFSIPRVILTVMAA
CESLDRSLEEAAHSLGAGHWRVVCDVIVPGLAPALVSCGAICFATSMGAFGTAFTLGTRL
NVTPVAIYNVFTNYANFTVAAALSVILGLVTWAVLLLARRMVGKSGVAL
NT seq 870 nt   +upstreamnt  +downstreamnt
atgccagcctcgccggaacacgcgctggctctgcgcaaggacgggtttttcaggctgcgg
ctgcgcccgaccgctgcggtggcgctggccccggcgatggcggtattgctggctttctgg
ctgctgccgttgacccatctgatcctgctcggtgcgcaaggcaccgatggcaatggcagc
ggctactggcaggtattgagcagtgctcagtacctgggcagtctggcgcagacttgtctg
ctggcgctggtggtgacgcttgtggcgttgctgatcggcggcatcagcggtgtgtttctg
gcccgtaatcatttttttgggcgctctgcgctggtggcactgctgacctttccgctggca
tttcccggcgtggtggtcggttttctggtgattctgctggccggtcggcaaggcatcttc
gctgcactcggtctgcaactggcgggggagcgctgggtgtttgcctactcgctcatcggt
ctgttcatcggctacctgtacttttcgataccgcgcgtgatcctcaccgtcatggccgct
tgcgaaagcctggaccgcagccttgaagaagccgcgcattcattgggtgccggtcactgg
cgggtggtgtgcgatgtgatcgtgccgggcctggcaccggctttggtgtcctgcggggcg
atctgtttcgcgacgtcgatgggcgcattcggcacggcgttcacgctgggtactcggctg
aacgtcacgccggtggcgatctacaacgtattcaccaattacgccaacttcaccgtggcc
gcggcgctgtcggtgatcctcggcctggtgacctgggcggtgctgttgctggcccggcgc
atggtcggaaaatcgggagttgccctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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