KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_1501
Entry
PSPTO_1501        CDS       T00118                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pst00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PSPTO_1501 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pst01007]
    PSPTO_1501 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pst03016]
    PSPTO_1501 (lysS)
Enzymes [BR:pst01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     PSPTO_1501 (lysS)
Amino acid related enzymes [BR:pst01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   PSPTO_1501 (lysS)
Transfer RNA biogenesis [BR:pst03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    PSPTO_1501 (lysS)
 Prokaryotic type
   Other AARSs
    PSPTO_1501 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AAO55021
UniProt: Q886S6
Position
1658196..1659698
AA seq 500 aa
MSDQQLDPQALQQEENTLIALRKEKLAAGRAKGQAFPNDFRRDSYCNDLQKQYVDKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAEVKTWDLGDIIAAE
GTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFR
VRSQVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTDSPSIRDVILFPHMRPQA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgagcgaccaacaactcgacccgcaagccctgcaacaggaagaaaacaccctgatcgcc
ctgcgcaaggaaaagcttgctgccggccgtgccaagggtcaggccttccccaacgacttc
cgccgcgacagctactgcaatgacctgcagaaacagtacgtcgacaagaccaaggaagaa
ctggcagaggcagcgatcccggtcaaggttgccggtcgcatcatgcttaaccgtggttcg
ttcatggtcatccaggacatgaccgggcgcatccaggtctatgtcaatcgcaaaaccctg
cctgaagaaaccctggccgaggtgaaaacctgggacctgggcgacatcatcgcggccgaa
ggtacgctggcacgctccggcaagggcgacctgtacgtcgaaatgaccagcgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgataccgagcag
cgctaccgccagcgttacgttgacctgatcgtcaacgaagacgtgcgcgaaaccttccgt
gtgcgctcgcaggtcatcgctcacatccgcagcttcctgatgcagcgtgacttccttgaa
gttgaaacgccgatgttgcagaccattcctggcggtgcggcagccaagccgtttgaaacc
caccacaatgcactggacctggaaatgttcctgcgtattgcaccggagctgtacctcaag
cgtctggtggtcggcggtttcgagaaagtcttcgagatcaaccgcaacttccgtaacgaa
ggtgtttcgacccggcataaccccgagttcaccatgctcgagttctaccaggcctacgct
gactacgaagacaacatggacctcaccgaagaactgttccgcgagctggcgcagctggtg
ctgggcagcaccgacgtgccttacggcgacaaggtgttccacttcggcgaaccgttcgtg
cgcctgtcggtgttcgattcgatcctcaagtacaaccctgagctgaccgctgccgatctg
caggatgtggacaaagcgcgcgccatcgccaagaaggcgggtgcgaaagtgctcggcttc
gaaggattgggcaaactgcaggtgatgattttcgaagaactggtcgagcacaagctggaa
cagccccacttcatcacccagtacccgttcgaagtgtcgccgctggcccgtcgcaacgat
gacaacccgaacgtcaccgaccgtttcgagctgttcatcggcggccgcgagatcgccaac
gcctactccgagctcaatgacgctgaagatcaggccgaacgcttccaggcccaggtggcc
gacaaggacgccggtgacgacgaagccatgcactacgacgccgactttgttcgtgcgctg
gaatacggcatgccgcccacggcgggtgaggggatcggtatcgaccggttggtgatgctg
ctcaccgactcgccgtcgatccgggacgtgatcctgttcccgcacatgcgcccccaggcg
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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